Return to main results Retrieve Phyre Job Id

Job DescriptionP14375
Confidence98.75%DateThu Jan 5 11:33:59 GMT 2012
Rank189Aligned Residues230
% Identity20%Templated1r6bx2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.25

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   135....140.........150.........160.........170.........180.........190.........200.........210....
Predicted Secondary structure 
















































Query SS confidence 















































































Query Sequence  TASQFGMVGKSPAMQHLLSEIALVAPSEATVLIHGDSGTGKELVARAIHASSARSEKPLVTLNCAALNESLLESELFGHE
Query Conservation        


 
     
   
   
    



 

 



   
  

  
     


 
 
           


  
Alig confidence 





















..












































...







Template Conservation      
 



   
  
   
 ..      


 







  
  

  
                 ...        
Template Sequence  VGGIDPLIGREKELERAIQVLC. . RRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSL. . . DIGAGTKY
Template Known Secondary structure  TT
S



S
T..SSSS


TTSST
S
GGGTT

...







Template Predicted Secondary structure 








..






















...


Template SS confidence 















































































   182.......190.........200... ......210.........220.........230.........240........ .250......
 
   215....220.........230.........240...... ...250.........260.........270.........280.........
Predicted Secondary structure 



















.....












Query SS confidence 































. . . . .










































Query Sequence  KGAFTGADKRREGRFVEADGGTLFLDEIGDIS. . . . . PMMQVRLLRAIQEREVQRVGSNQIISVDVRLIAATHRDLAAEV
Query Conservation              
    
  


 
  
  
 .....   
  
   
                  


  
   
    
Alig confidence 































.....












.........













..




Template Conservation                       

 


   
                
  .........         
    ..     
Template Sequence  RGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKP. . . . . . . . . LLSSGKIRVIGSTT. . YQEFS
Template Known Secondary structure  SS
SSSS
TTTTTTTTS

SSS
SS.........
SSS



..
Template Predicted Secondary structure 














.........



..
Template SS confidence 















































































   260.........270.........280.........290.........300......... 310.........320... .....
 
   290.........300.........310.........320.........330.........340.........350. ...... ..360
Predicted Secondary structure 
























........





.
Query SS confidence 





























































. . . . . . . .





.


Query Sequence  NAGRFRQDLYYRLNVVAIEVPSLRQRREDIPLLAGHFLQRFAERNRKAVKGFTPQAMDLLIH. . . . . . . . YDWPGN. IRE
Query Conservation      
   
   
    
 






  

  
    
              
  
   
  ........
 



.
 
Alig confidence 





















....




















...











........





.


Template Conservation            
    
      ....      

             ... 
       
  

            

 
Template Sequence  NIFEKDRALARRFQKIDITEPS. . . . IEETVQIINGLKPKYEAHHDV. . . RYTAKAVRAAVELAVKYINDRHLPDKAIDV
Template Known Secondary structure 




TTSSGGG




....T
...



TTS
TT
Template Predicted Secondary structure 












....


...











Template SS confidence 















































































   329330.........340.........350 .........360.........370. ........380.........390.........400.
 
   361........370.. .......380.......
Predicted Secondary structure 
...





Query SS confidence 











. . .














Query Sequence  LENAVERAVVLL. . . TGEYISERELPLAIA
Query Conservation 
   
       ...    
    
     
Alig confidence 











...














Template Conservation 
  
               
   

   
 
Template Sequence  IDEAGARARLMPVSKRKKTVNVADIESVVA
Template Known Secondary structure  SSS




S

Template Predicted Secondary structure 






Template SS confidence 





























   402.......410.........420.........430.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions