|   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | T | H | D | N | I | D | I | L | V | V | D | D | D | I | S | H | C | T | I | L | Q | A | L | L | R | G | W | G | Y | N | V | A | L | A | N | S | G | R | Q | A | L | E | Q | V | R | E | Q | V | F | D | L | V | L | C | D | V | R | M | A | E | M | D | G | I | A | T | L | K | E | I | K | A | L | N | P | A | I | P | V |
Query Conservation |   |
|   |   |   |   |   |   |
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |
|   |   |   |   |
|
|   |   |   |
|   |   |   |   |
|
|
|
|
|
|
|   |   |
|
|   |   |   |
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |
|
|
Alig confidence |   |
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   | . | . | . |
|
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |
|
|
|
|   |
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |
|
|   |   |   |   |   |   |
|
|
Template Sequence |   |
M | N | K | . |
. |
. |
K | I | L | V | V | D | D | E | E | S | I | V | T | L | L | Q | Y | N | L | E | R | S | G | Y | D | V | I | T | A | S | D | G | E | E | A | L | K | K | A | E | T | E | K | P | D | L | I | V | L | D | V | M | L | P | K | L | D | G | I | E | V | C | K | Q | L | R | Q | Q | K | L | M | F | P | I |
Template Known Secondary structure |   |
|
|
| . | . | . |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |
|
| S |  |  |  |  |  | S | S |
| S | S | S |
|  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
|  |
Template Predicted Secondary structure |   |
|
|
| . | . | . |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | |
|
|
. | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . |
  |
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | I | M | T | A | Y | S | S | V | E | T | A | V | E | A | L | K | T | G | A | L | D | Y | L | I | K | P | L | D | F | D | N | L | Q | A | T | L | E | K | A | L | A | H | T |
Query Conservation |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|
|
|   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|   |
Template Sequence |   |
L | M | L | T | A | K | D | E | E | F | D | K | V | L | G | L | E | L | G | A | D | D | Y | M | T | K | P | F | S | P | R | E | V | N | A | R | V | K | A | I | L | R | R | S |
Template Known Secondary structure |   |
 |  |  |  |
| T | T |
|
|
|
|  |  |  |  |  |  | T | T |
|
|  |  |  |  | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . |
  |