Return to main results Retrieve Phyre Job Id

Job DescriptionP14375
Confidence99.38%DateThu Jan 5 11:33:59 GMT 2012
Rank144Aligned Residues222
% Identity17%Templated1g41a_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   141........150..... ....160.........170.........180.........190.........200..
Predicted Secondary structure 









............




























......
Query SS confidence 














. . . . . . . . . . . .














































. . . . . .
Query Sequence  MVGKSPAMQHLLSEI. . . . . . . . . . . . ALVAPSEATVLIHGDSGTGKELVARAIHASSARSEKPLVTLNCAALN. . . . . .
Query Conservation 


 
     
   
............   
    



 

 



   
  

  
     


 
 
    ......
Alig confidence 














............






























...












......
Template Conservation 



  

  
  
                   
  


 







 

  

  
...      
            
Template Sequence  IIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLA. . . NAPFIKVEATKFTVGKEVD
Template Known Secondary structure 

S
S
TTTTTT






TTSST...T

GGGG




T
Template Predicted Secondary structure 



















...











Template SS confidence 















































































   17..20.........30.........40.........50.........60.........70.... .....80.........90...
 
   203......210.........220..... ....230.........240..... ....250...
Predicted Secondary structure  ................














.







............
Query SS confidence  . . . . . . . . . . . . . . . .






















.



















. . . . . . . . . . . .







Query Sequence  . . . . . . . . . . . . . . . . ESLLESELFGHEKGAFTGADKRR. EGRFVEADGGTLFLDEIGDI. . . . . . . . . . . . SPMMQVRL
Query Conservation  ................       


             . 
    
  


 
  
  
............    
  
Alig confidence  ................






















.



















............







Template Conservation       
                                            

 



                      
Template Sequence  SIIRDLTDSAMKLVRQQEIAKNRLIDDEAAKLINPEELKQKAIDAVEQNGIVFIDEIDKICKKGEYSGADVSREGVQRDL
Template Known Secondary structure  S



GGGS
SS


TGGGGS

SS
SSS
Template Predicted Secondary structure 


























Template SS confidence 















































































   98.100.........110.........120.........130.........140.........150.........160.........170.......
 
   254.....260.........270.........280.........290.........300.........310.........320.........330...
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  LRAIQEREVQRVGSNQIISVDVRLIAATHRDLAAEVNAGRFRQDLYYRLNVVAIEVPSLRQRREDIPLLAGHFLQRFAER
Query Conservation     
                  


  
   
        
   
   
    
 






  

  
    
      
Alig confidence 














.














...













































Template Conservation 
   
          .        
      ...             
                 

             
Template Sequence  LPLVEGSTVSTKHGM. VKTDHILFIASGAFQ. . . VARPSDLIPELQGRLPIRVELTALSAADFERILTEPHASLTEQYKA
Template Known Secondary structure 

TT.
TT


S...S

GGGS
TT






SSTT
Template Predicted Secondary structure 










.








...












Template SS confidence 















































































   283......290....... ..300.........310.. .......320.........330.........340.........350........
 
   334.....340.........350..... ....360.........
Predicted Secondary structure  ...












.......

Query SS confidence  . . .





















. . . . . . .













Query Sequence  . . . NRKAVKGFTPQAMDLLIHYDWP. . . . . . . GNIRELENAVERAV
Query Conservation  ...        
  
   
  
 

.......


 

   
    
Alig confidence  ...





















.......













Template Conservation          
      
  
               

 
   

   
Template Sequence  LMATEGVNIAFTTDAVKKIAEAAFRVNEKTENIGARRLHTVMERLM
Template Known Secondary structure  TTT

S


GGG
Template Predicted Secondary structure 


















Template SS confidence 













































   359360.........370.........380.........390.........400....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions