Job Description P14375 Confidence 98.06% Date Thu Jan 5 11:33:59 GMT 2012 Rank 212 Aligned Residues 203 % Identity 9% Template c3te6A_ PDB info PDB header:gene regulation Chain: A: PDB Molecule:regulatory protein sir3; PDBTitle: crystal structure of the s. cerevisiae sir3 aaa+ domain Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.						.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.						.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.																			.	.	.	.	.
Query SS confidence																													.	.	.	.	.																			.	.	.	.	.
Query Sequence		A	P	S	E	A	T	V	L	I	H	G	D	S	G	T	G	K	E	L	V	A	R	A	I	H	A	S	.	.	.	.	.	S	A	R	S	E	K	P	L	V	T	L	N	C	A	A	L	N	E	.	.	.	.	.	S	L	L	E	S	E	L	F	G	H	E	K	G	A	F	T	G	A	D	K	R	R	E	G	R
Query Conservation																													.	.	.	.	.																			.	.	.	.	.
Alig confidence																													.	.	.	.	.																			.	.	.	.	.
Template Conservation
Template Sequence		S	S	Q	N	K	L	F	Y	I	T	N	A	D	D	S	T	K	F	Q	L	V	N	D	V	X	D	E	L	I	T	S	S	A	R	K	E	L	P	I	F	D	Y	I	H	I	D	A	L	E	L	X	D	A	L	Y	E	K	I	W	F	A	I	S	K	E	N	G	D	I	S	L	E	A	L	N	F	Y	I	T	N
Template Known Secondary structure		T	T												S																	T	T	T	T	T	S	S										T	T															S
Template Predicted Secondary structure
Template SS confidence
		569	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.
		229	230	.	.	.	.	.			.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure									.	.											.
Query SS confidence									.	.											.
Query Sequence		F	V	E	A	D	G	G	.	.	T	L	F	L	D	E	I	G	D	I	.	S	P	M	M	Q	V	R	L	L	R	A	I	Q	E	R	E	V	Q	R	V	G	S	N	Q	I	I	S	V	D	V	R	L	I	A	A	T	H	R	D	L	A	A	E	V	N	A	G	R	F	R	Q	D	L	Y	Y	R	L	N	V	V
Query Conservation									.	.											.
Alig confidence									.	.											.															.	.	.	.	.	.	.	.	.	.	.															.	.					.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.															.	.					.
Template Sequence		V	P	K	A	K	K	R	K	T	L	I	L	I	Q	N	P	E	N	L	L	S	E	K	I	L	Q	Y	F	E	K	W	I	S	S	.	.	.	.	.	.	.	.	.	.	.	K	N	S	K	L	S	I	I	C	V	G	G	H	N	.	.	V	T	I	R	.	E	Q	I	N	I	X	P	S	L	K	A	H	F	T
Template Known Secondary structure		S		G	G	G	S											S	S	S			T													.	.	.	.	.	.	.	.	.	.	.	S	S											S	S	.	.					.					T						T	T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.															.	.					.
Template SS confidence
		653	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.												.	.	.	690	.	.	.	.	.	.	.	.	.	700			.	.	.	.		.	.	.	.	.	710	.	.	.	.	.	.	.	.
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.																					.	.	340	.	.	.	.	.	.	.	.	.	350	.	.			.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query Sequence		A	I	E	V	P	S	L	R	Q	R	R	E	D	I	P	L	L	A	G	H	F	L	Q	R	F	A	E	R	N	R	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	K	G	F	T	P	Q	A	M	D	L	L	I	H	Y	.	.	D	W	P	G	N	I	R	E	L	E	N
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Alig confidence								.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation								.	.
Template Sequence		E	I	K	L	N	K	.	.	V	D	K	N	E	L	Q	Q	X	I	I	T	R	L	K	S	L	L	K	P	F	H	V	K	V	N	D	K	K	E	X	T	I	Y	N	N	I	P	D	N	V	I	V	I	N	H	K	I	N	N	K	I	T	Q	L	I	A	K	N	V	A	N	V	S	G	S	T	E	K	A	F	K
Template Known Secondary structure								.	.																											T	T											T	T																										S
Template Predicted Secondary structure								.	.
Template SS confidence
		719	720	.	.	.	.			.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.
		364	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	E	R	A	V	V	L	L	T	G	E	Y	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	C	E	A	A	V	E	I	S	K	K	D	F	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		805	.	.	.	.	810	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions