Job Description P14375 Confidence 97.10% Date Thu Jan 5 11:33:59 GMT 2012 Rank 223 Aligned Residues 208 % Identity 17% Template c3qmzA_ PDB info PDB header:motor protein Chain: A: PDB Molecule:cytoplasmic dynein heavy chain; PDBTitle: crystal structure of the cytoplasmic dynein heavy chain motor domain Resolution 6.00 Å

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		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	L	V	A	P	S	E	A	T	V	L	I	H	G	D	S	G	T	G	K	E	L	V	A	R	A	I	H	A	S	S	A	R	S	E	K	P	L	V	T	L	N	C	A	A	L	N	E	S	L	L	E	S	E	L	F	G	H	E	K	G	A	F	T	G	A	D	K	R	R	E	G	R	F	V	E	A	D	G
Query Conservation
Alig confidence																														.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	D	S	L	H	Q	K	Y	G	G	C	F	F	G	P	A	G	T	G	K	T	E	T	V	K	A	F	.	.	.	G	Q	N	L	G	R	V	V	V	V	F	N	C	D	D	S	F	D	Y	Q	V	L	S	R	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	I	T	Q	I	G	A	W
Template Known Secondary structure								T	T	T	T							T	T	S	S									.	.	.	T	S	S											S	S	S	S		S								.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T
Template Predicted Secondary structure																														.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1782	.	.	.	.	.	.	.	1790	.	.	.	.	.	.	.	.	.	1800	.	.	.	.	.	.	.	.	.				1810	.	.	.	.	.	.	.	.	.	1820	.	.	.	.	.	.	.	.	.	1830	.	.	.	.	.															.	.	.	.	1840	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.										.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.
Query Sequence		G	T	L	F	L	D	E	I	G	D	I	S	P	M	M	Q	V	R	L	L	R	A	I	Q	.	.	.	.	.	.	.	.	.	E	R	E	V	Q	R	V	G	S	N	Q	I	I	S	V	D	V	R	L	I	A	A	T	H	R	D	L	A	A	E	V	N	A	G	R	F	R	Q	D	L	Y	Y	R	L	N	V	V
Query Conservation																										.	.	.	.	.	.	.	.	.
Alig confidence			.	.																						.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	.	.	C	F	D	E	F	N	R	L	D	E	K	V	L	S	A	V	S	A	N	I	Q	Q	I	Q	N	G	L	Q	V	G	K	S	H	I	T	L	L	E	E	E	T	P	L	S	P	H	T	A	V	F	I	T	L	.	.	.	.	.	.	.	.	.	.	.	.	L	P	E	N	L	K	K	S	F	R	E	F
Template Known Secondary structure			.	.				T	T	T	T	S	S																	T	S	T	T	S	S	S						S	S															.	.	.	.	.	.	.	.	.	.	.	.							T	T	T
Template Predicted Secondary structure			.	.																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1845			.	.	.	.	1850	.	.	.	.	.	.	.	.	.	1860	.	.	.	.	.	.	.	.	.	1870	.	.	.	.	.	.	.	.	.	1880	.	.	.	.	.	.	.	.	.	1890	.	.	.	.	.	.	.	.													.	1900	.	.	.	.	.	.	.	.	.	1910
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.			.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		A	I	E	V	P	S	L	R	Q	R	R	E	D	I	P	L	L	A	G	H	F	L	Q	.	.	R	F	A	E	R	N	R	K	A	V	K	G	F	T	P	Q	A	M	D	L	L	I	H	Y	D	W	P	G	N	I	R	E	L	E	N	A	V	E	R	A	V	V	L	L	T	G	E	Y	I	S	E	R	E	L	P
Query Conservation																									.	.
Alig confidence				.					.																.	.												.																.	.
Template Conservation				.					.																													.																.	.
Template Sequence		S	M	.	K	S	Q	S	.	G	T	I	A	E	M	I	L	Q	I	M	G	F	E	D	S	K	S	L	A	S	K	I	V	H	F	L	E	.	L	L	S	S	K	C	S	S	M	N	H	Y	H	F	G	.	.	L	R	T	L	K	G	V	L	R	N	C	S	P	L	I	S	E	F	G	E	G	E	K	T	V	V
Template Known Secondary structure				.					.													T	S	S														.								S	S	S						.	.																		S	S		S	S
Template Predicted Secondary structure				.					.																													.																.	.
Template SS confidence
		1920	.		.	.	.	.		.	.	.	.	1930	.	.	.	.	.	.	.	.	.	1940	.	.	.	.	.	.	.	.	.	1950	.	.	.		.	.	.	.	.	.	1960	.	.	.	.	.	.	.	.			.	1970	.	.	.	.	.	.	.	.	.	1980	.	.	.	.	.	.	.	.	.	1990	.	.	.	.
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	I	A	S	T	P	I	P	L	G	Q	S	Q	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	S	L	K	R	V	I	L	P	S	L	G	D	T	D
Template Known Secondary structure										S	S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		1996	.	.	.	2000	.	.	.	.	.	.	.	.	.	2010

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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