Job Description P14375 Confidence 99.50% Date Thu Jan 5 11:33:59 GMT 2012 Rank 135 Aligned Residues 244 % Identity 18% Template c3hteC_ PDB info PDB header:motor protein Chain: C: PDB Molecule:atp-dependent clp protease atp-binding subunit clpx; PDBTitle: crystal structure of nucleotide-free hexameric clpx Resolution 4.03 Å

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		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.					.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.																																														.
Query SS confidence																		.	.	.	.																																														.
Query Sequence		M	V	G	K	S	P	A	M	Q	H	L	L	S	E	I	A	.	.	.	.	L	V	A	P	S	E	A	T	V	L	I	H	G	D	S	G	T	G	K	E	L	V	A	R	A	I	H	A	S	S	A	R	S	E	K	P	L	V	T	L	N	C	A	A	L	.	N	E	S	L	L	E	S	E	L	F	G	H	E	K
Query Conservation																		.	.	.	.																																														.
Alig confidence																		.	.	.	.																															.	.	.													.
Template Conservation																																																				.	.	.
Template Sequence		V	I	G	Q	E	Q	A	K	K	V	L	A	V	A	V	Y	N	H	Y	K	R	L	R	N	G	K	S	N	I	L	L	I	G	P	T	G	S	G	K	T	L	L	A	E	T	L	A	R	L	L	.	.	.	D	V	P	F	T	M	A	D	A	T	T	L	E	D	V	E	N	I	I	Q	K	L	L	Q	K	C	D
Template Known Secondary structure		S		S																																T	T	S	S											T	T	.	.	.	T								G	G	G			T	T	T									T	T	T
Template Predicted Secondary structure																																																				.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.				.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.										.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure																																.	.																				.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.																				.	.	.	.	.	.	.	.	.
Query Sequence		G	A	F	T	G	A	D	K	R	R	E	G	R	F	V	E	A	D	G	G	T	L	F	L	D	E	I	G	D	I	.	.	S	P	M	M	Q	V	R	L	L	R	A	I	Q	E	R	E	V	Q	R	.	.	.	.	.	.	.	.	.	V	G	S	N	Q	I	I	S	V	D	V	R	L	I	A	A	T	H	R	D
Query Conservation																																.	.																				.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.																			.	.																				.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	.	.	.	.	.	.	.	.	.	.	.	D	V	Q	K	A	Q	R	G	I	V	Y	I	D	Q	I	D	K	I	S	R	G	E	G	V	Q	Q	A	L	L	K	L	I	E	G	V	D	T	S	K	I	L	F	I	C	G	G	A	F	A	G	L	D	K	V	I	S	H	R	V	S	E	G	E	L	L	A	Q	V
Template Known Secondary structure		T	.	.	.	.	.	.	.	.	.	.	.							T								G	G	G	G																			T	T	S	S									T	T																	T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		171												.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.					.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.			.
Predicted Secondary structure																																							.	.	.	.																																					.	.
Query SS confidence																																							.	.	.	.																																					.	.
Query Sequence		L	A	A	E	V	N	A	G	R	F	R	Q	D	L	Y	Y	R	L	N	V	V	A	I	E	V	P	S	L	R	Q	R	R	E	D	I	P	L	.	.	.	.	L	A	G	H	F	L	Q	R	F	A	E	R	N	R	K	A	V	K	G	F	T	P	Q	A	M	D	L	L	I	H	Y	D	W	P	G	N	.	.	I
Query Conservation																																							.	.	.	.																																					.	.
Alig confidence																																							.	.	.	.																			.																		.	.
Template Conservation																																																													.
Template Sequence		E	P	E	D	L	I	K	F	G	L	I	P	E	F	I	G	R	L	P	V	V	A	T	L	N	E	L	S	E	E	A	L	I	Q	I	L	K	E	P	K	N	A	L	T	K	Q	Y	Q	A	L	F	N	L	E	G	V	D	L	E	.	F	R	D	E	A	L	D	A	I	A	K	K	A	M	A	R	K	T	G	A
Template Known Secondary structure										T							T	T									S												S	S	T	T													T	T					.																T	T		T	T
Template Predicted Secondary structure																																																													.
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	L	E	N	A	V	E	R	A	V	V	L	L	T	G	E	Y	I	S	E	R	E	L	P	L	A	I	A	S	T	P	I	P	L	G	Q	S	Q	D	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	G	L	R	S	I	V	E	A	A	L	L	D	T	M	Y	D	L	P	S	M	E	D	V	E	K	V	V	I	D	E	S	V	I	D	G	Q	S	K	P	L
Template Known Secondary structure																		S	S	T	T	S			S										T	S			S
Template Predicted Secondary structure
Template SS confidence
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions