Job Description P14375 Confidence 98.84% Date Thu Jan 5 11:33:59 GMT 2012 Rank 182 Aligned Residues 220 % Identity 18% Template c3h4mC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:proteasome-activating nucleotidase; PDBTitle: aaa atpase domain of the proteasome- activating nucleotidase Resolution 3.11 Å

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		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.												160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	A	V	T	A	S	Q	F	G	M	V	G	K	S	P	A	M	Q	H	L	L	S	E	I	A	L	V	A	.	.	.	.	.	.	.	.	.	.	.	P	S	E	A	T	V	L	I	H	G	D	S	G	T	G	K	E	L	V	A	R	A	I	H	A	S	S	A	R	S	E	K	P	L	V	T	L	N	C	A	A
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.																											.	.	.											.	.
Template Conservation																																																																			.	.	.											.	.
Template Sequence		E	R	P	N	V	R	Y	E	D	I	G	G	L	E	K	Q	M	Q	E	I	R	E	V	V	E	L	P	L	K	H	P	E	L	F	E	K	V	G	I	E	P	P	K	G	I	L	L	Y	G	P	P	G	T	G	K	T	L	L	A	K	A	V	A	T	E	.	.	.	T	N	A	T	F	I	R	V	V	G	.	.
Template Known Secondary structure		S	S					G	G	G			S										T	T	T	T													T					S						S	S	S	S	S	S												.	.	.	T	T								G	.	.
Template Predicted Secondary structure																																																																			.	.	.											.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.				.	.	230	.	.	.	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.															.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	N	E	S	L	L	E	S	E	L	F	G	H	E	K	G	A	F	T	G	A	D	K	R	R	E	G	R	F	V	E	A	D	G	G	T	L	F	L	D	E	I	G	D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	M	M	Q	V	R	L	L	R	A	I	Q	E	R	E	V	Q	R	V	G
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.																																																																			.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	S	E	L	V	K	K	F	I	G	E	G	A	S	L	V	K	D	I	F	K	L	A	K	E	K	A	P	S	I	I	F	I	D	E	I	D	A	I	A	A	K	R	T	D	A	L	T	G	G	D	R	E	V	Q	R	T	L	M	Q	L	L	A	E	M	D	G	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	G	G	S				S	T	T	T	T	T													T		S								G	G	G	T	S	B			S	S	S				S	T														T	T	S	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.																																																																			.	.	.	.	.	.	.
Template SS confidence
									238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	N	Q	I	I	S	V	D	V	R	L	I	A	A	T	H	R	D	L	A	A	E	V	N	A	G	R	F	R	Q	D	L	Y	Y	R	L	N	V	V	A	I	E	V	P	S	L	R	Q	R	R	E	D	I	P	L	L	A	G	H	F	L	Q	R	F	A	E	R	N	R	K	A	V	K	G	F	T	P	Q	A	M
Query Conservation
Alig confidence		.	.																	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Template Conservation		.	.																	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Template Sequence		.	.	F	D	A	R	G	D	V	K	I	I	G	A	T	N	R	P	.	.	.	.	.	.	.	D	I	L	D	P	A	I	L	R	P	G	R	F	D	R	I	I	E	V	P	A	P	D	E	K	G	.	.	.	.	.	.	.	.	.	R	L	E	I	L	K	I	H	T	R	K	M	N	L	A	E	D	V	N	L
Template Known Secondary structure		.	.	S		S	S	S	S								S	S	G	.	.	.	.	.	.	.	G	G	B						S	T	T	S															.	.	.	.	.	.	.	.	.								T	T	T	T	S		B		S	S
Template Predicted Secondary structure		.	.																	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Template SS confidence
				304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.								320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.										.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.				.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.
Query SS confidence																												.	.	.
Query Sequence		D	L	L	I	H	Y	D	W	P	G	N	I	R	E	L	E	N	A	V	E	R	A	V	V	L	L	.	.	.	T	G	E	Y	I	S	E	R	E	L	P	L	A	I	A	S
Query Conservation																												.	.	.
Alig confidence																												.	.	.
Template Conservation
Template Sequence		E	E	I	A	K	M	T	E	G	C	V	G	A	E	L	K	A	I	C	T	E	A	G	M	N	A	I	R	E	L	R	D	Y	V	T	M	D	D	F	R	K	A	V	E	K
Template Known Secondary structure						T	T	S	T	T																				T	T		S	S	B
Template Predicted Secondary structure
Template SS confidence
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions