Job Description P14375 Confidence 99.50% Date Thu Jan 5 11:33:59 GMT 2012 Rank 136 Aligned Residues 206 % Identity 14% Template c3bosA_ PDB info PDB header:hydrolase regulator,dna binding protein Chain: A: PDB Molecule:putative dna replication factor; PDBTitle: crystal structure of a putative dna replication regulator hda2 (sama_1916) from shewanella amazonensis sb2b at 1.75 a resolution Resolution 1.75 Å

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		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	G	K	S	P	A	M	Q	H	L	L	S	E	I	A	L	V	A	P	S	E	A	T	V	L	I	H	G	D	S	G	T	G	K	E	L	V	A	R	A	I	H	A	S	S	A	R	S	E	K	P	L	V	T	L	N	C	A	A	L	N	E	S	L	L	E	S	E	L	F	G	H	E	K	G	A	F	T	G
Query Conservation
Alig confidence																		.	.																																																											.	.	.	.
Template Conservation																		.	.																																																											.	.	.	.
Template Sequence		Y	P	G	N	D	E	L	I	G	A	L	K	S	A	A	S	.	.	G	D	G	V	Q	A	I	Y	L	W	G	P	V	K	S	G	R	T	H	L	I	H	A	A	C	A	R	A	N	E	L	E	R	R	S	F	Y	I	P	L	G	I	H	A	S	I	S	T	A	L	L	E	G	L	E	Q	F	D	.	.	.	.
Template Known Secondary structure																		.	.	T		S		S							S	T	T	S	S															T	T								G	G	G	G	G	G	S		G	G	G	G	T	T	G	G	G	S	S	.	.	.	.
Template Predicted Secondary structure																		.	.																																																											.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	K	R	R	E	G	R	F	V	E	A	D	G	G	T	L	F	L	D	E	I	G	D	I	S	P	M	M	Q	V	R	L	L	R	A	I	Q	E	R	E	V	Q	R	V	G	S	N	Q	I	I	S	V	D	V	R	L	I	A	A	T	H	R	D	L	A	A	E	V	N	A	G	R	F	R	Q	D	L	Y	Y
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	L	I	C	I	D	D	V	D	A	V	A	G	H	P	L	W	E	E	A	I	F	D	L	Y	N	R	V	A	E	Q	K	R	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	L	I	V	S	A	S	A	S	P	X	E	.	.	.	A	G	F	V	L	P	D	L	V	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.						T	G	G	G	G	T	T																				S	.	.	.	.	.	.	.	.	.	.	.	.	.								S	S		T	T	T	.	.	.	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.
Template SS confidence
											106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.														.	.	140	.	.	.	.	.	.	.	.	.	150				.	.	.	.	.	.	.	.	.	160
		301	.	.		.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.			.	.	.	.
Predicted Secondary structure					.																																																																							.	.
Query SS confidence					.																																																																							.	.
Query Sequence		R	L	N	.	V	V	A	I	E	V	P	S	L	R	Q	R	R	E	D	I	P	L	L	A	G	H	F	L	Q	R	F	A	E	R	N	R	K	A	V	K	G	F	T	P	Q	A	M	D	L	L	I	H	Y	D	W	P	G	N	I	R	E	L	E	N	A	V	E	R	A	V	V	L	L	T	.	.	G	E	Y	I
Query Conservation					.																																																																							.	.
Alig confidence					.														.	.	.	.	.	.															.	.	.														.																					.	.
Template Conservation																			.	.	.	.	.	.															.	.	.														.
Template Sequence		R	X	H	W	G	L	T	Y	Q	L	Q	P	X	X	D	D	E	.	.	.	.	.	.	K	L	A	A	L	Q	R	R	A	A	X	R	G	L	.	.	.	Q	L	P	E	D	V	G	R	F	L	L	N	R	.	X	A	R	D	L	R	T	L	F	D	V	L	D	R	L	D	K	A	S	X	V	H	Q	R	K	L
Template Known Secondary structure						S										G	G	G	.	.	.	.	.	.												T	T		.	.	.														.	T	T	T																				T
Template Predicted Secondary structure																			.	.	.	.	.	.															.	.	.														.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.							.	.	180	.	.	.	.	.	.	.	.	.	190	.				.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		378	.	380	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	R	E	L	P	L	A	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	I	P	F	V	K	E	X	L	R
Template Known Secondary structure											T
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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