Job Description P14375 Confidence 98.84% Date Thu Jan 5 11:33:59 GMT 2012 Rank 183 Aligned Residues 230 % Identity 18% Template c2v1uA_ PDB info PDB header:replication Chain: A: PDB Molecule:cell division control protein 6 homolog; PDBTitle: structure of the aeropyrum pernix orc1 protein in complex2 with dna Resolution 3.10 Å

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		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.			.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.							.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.																						.	.	.	.	.	.
Query SS confidence																													.	.																						.	.	.	.	.	.
Query Sequence		Q	F	G	M	V	G	K	S	P	A	M	Q	H	L	L	S	E	I	A	L	V	A	P	S	E	A	T	.	.	V	L	I	H	G	D	S	G	T	G	K	E	L	V	A	R	A	I	H	A	S	.	.	.	.	.	.	S	A	R	S	E	K	P	L	V	T	L	N	C	A	A	L	N	E	S	L	L	E	S	E
Query Conservation																													.	.																						.	.	.	.	.	.
Alig confidence																													.	.																						.	.	.	.	.	.
Template Conservation
Template Sequence		P	D	V	L	P	H	R	E	A	E	L	R	R	L	A	E	V	L	A	P	A	L	R	G	E	K	P	S	N	A	L	L	Y	G	L	T	G	T	G	K	T	A	V	A	R	L	V	L	R	R	L	E	A	R	A	S	S	L	G	V	L	V	K	P	I	Y	V	N	A	R	H	R	E	T	P	Y	R	V	A	S
Template Known Secondary structure			S			T	T											T	T	G	G	G	T	S	S										B		T	T	S	S																				T										T	T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.										.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.																						.
Query SS confidence																	.	.	.	.	.	.	.	.	.																						.
Query Sequence		L	F	G	H	E	K	G	A	F	T	G	A	D	K	R	.	.	.	.	.	.	.	.	.	R	E	G	R	F	V	E	A	D	G	G	T	L	F	L	D	E	I	G	D	I	.	S	P	M	M	Q	V	R	L	L	R	A	I	Q	E	R	E	V	Q	R	V	G	S	N	Q	I	I	S	V	D	V	R	L	I	A
Query Conservation																	.	.	.	.	.	.	.	.	.																						.
Alig confidence																	.	.	.	.	.	.	.	.	.																						.															.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.
Template Sequence		A	I	A	E	A	V	G	V	R	V	P	F	T	G	L	S	V	G	E	V	Y	E	R	L	V	K	R	L	S	R	L	R	G	I	Y	I	I	V	L	D	E	I	D	F	L	P	K	R	P	G	G	Q	D	L	L	Y	R	I	T	R	.	.	.	.	.	.	.	.	.	.	I	N	Q	E	L	V	S	L	V	G
Template Known Secondary structure								S					S	S																T	T	S		S								T	T	T					S	T	T											.	.	.	.	.	.	.	.	.	.	G	G	G
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.											170	.	.	.	.	.	.	.	.	.
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.			350	.	.	.	.	.	.	.
Predicted Secondary structure																																																																								.	.
Query SS confidence																																																																								.	.
Query Sequence		A	T	H	R	D	L	A	A	E	V	N	A	G	R	F	R	Q	D	L	Y	Y	R	L	N	V	V	A	I	E	V	P	S	L	R	Q	R	R	E	D	I	P	L	L	A	G	H	F	L	Q	R	F	A	E	R	N	R	K	A	V	K	G	F	T	P	Q	A	M	D	L	L	.	.	I	H	Y	D	W	P	G	N
Query Conservation																																																																								.	.
Alig confidence							.	.	.	.																											.	.																.	.	.	.	.														.	.
Template Conservation							.	.	.	.																											.	.																.	.	.	.	.
Template Sequence		I	T	N	S	L	.	.	.	.	G	F	V	E	N	L	E	P	R	V	K	S	S	L	G	E	V	E	L	V	F	P	P	Y	T	A	.	.	P	Q	L	R	D	I	L	E	T	R	A	E	E	A	F	.	.	.	.	.	N	P	G	V	L	D	P	D	V	V	P	L	C	A	A	L	A	A	R	E	H	G	D
Template Known Secondary structure				S		S	.	.	.	.	T	T	S	S	S	S						T	T	T	T	S					B						.	.															B	.	.	.	.	.		T	T	T	B		S	S											S	S	S
Template Predicted Secondary structure							.	.	.	.																											.	.																.	.	.	.	.
Template SS confidence
		185	.	.	.	.					190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.			.	.	.	.	220	.	.	.	.	.	.	.	.	.	230						.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.				.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		I	R	E	L	E	N	A	V	E	R	A	V	V	L	L	.	.	.	T	G	E	Y	I	S	E	R	E	L	P	L	A	I	A	S
Query Conservation																	.	.	.
Alig confidence																	.	.	.
Template Conservation
Template Sequence		A	R	R	A	L	D	L	L	R	V	A	G	E	I	A	E	R	R	R	E	E	R	V	R	R	E	H	V	Y	S	A	R	A	E
Template Known Secondary structure																			T	T		S		B
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions