Job Description P14375 Confidence 98.61% Date Thu Jan 5 11:33:59 GMT 2012 Rank 197 Aligned Residues 204 % Identity 15% Template c1sxjA_ PDB info PDB header:replication Chain: A: PDB Molecule:activator 1 95 kda subunit; PDBTitle: crystal structure of the eukaryotic clamp loader2 (replication factor c, rfc) bound to the dna sliding clamp3 (proliferating cell nuclear antigen, pcna) Resolution 2.85 Å

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		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.																.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	S	Q	F	G	M	V	G	K	S	P	A	M	Q	H	L	L	S	E	I	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	P	S	E	A	T	V	L	I	H	G	D	S	G	T	G	K	E	L	V	A	R	A	I	H	A	S	S	A	R	S	E	K	P	L	V	T	L	N	C	A	A
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Template Conservation																																																																				.	.	.
Template Sequence		T	N	L	Q	Q	V	C	G	N	K	G	S	V	M	K	L	K	N	W	L	A	N	W	E	N	S	K	K	N	S	F	K	H	A	G	K	D	G	S	G	V	F	R	A	A	M	L	Y	G	P	P	G	I	G	K	T	T	A	A	H	L	V	A	Q	E	L	.	.	.	G	Y	D	I	L	E	Q	N	A	S	D
Template Known Secondary structure		S	S	G	G	G			S														T							T	T	T					T	T	S	T	T	S		S							S	T	T	S	S												T	.	.	.	T								T	T	S
Template Predicted Secondary structure																																																																				.	.	.
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370				.	.	.	.	.	.	.	.	.	380	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.				.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.
Query SS confidence																																																		.	.	.
Query Sequence		L	N	E	S	L	L	E	S	E	L	F	G	H	E	K	G	A	F	T	G	A	D	K	R	R	E	G	R	F	V	E	A	D	G	G	T	L	F	L	D	E	I	G	D	I	S	P	M	.	.	.	M	Q	V	R	L	L	R	A	I	Q	E	R	E	V	Q	R	V	G	S	N	Q	I	I	S	V	D	V	R	L
Query Conservation																																																		.	.	.
Alig confidence																																.																		.	.	.																.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.																																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	R	S	K	T	L	L	N	A	G	V	K	N	A	L	D	N	M	S	V	V	G	Y	F	K	H	Q	N	L	N	.	G	K	H	F	V	I	I	M	D	E	V	D	G	M	S	G	G	D	R	G	G	V	G	Q	L	A	Q	F	C	R	K	T	S	T	P	.	.	.	.	.	.	.	.	.	.	.	L	I	L
Template Known Secondary structure											T	G	G	G	G	T	T				S	T	T	T	T	T				S	S	.	T	T	S							S	G	G	G			T	T	S	T	T													S	S		.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																.																																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.		.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.												.	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	A	T	H	R	D	L	A	A	E	V	N	A	G	R	F	R	Q	D	L	Y	Y	R	L	N	V	V	A	I	E	V	P	S	L	R	Q	R	R	E	D	I	P	L	L	A	G	H	F	L	Q	R	F	A	E	R	N	R	K	A	V	K	G	F	T	P	Q	A	M	D	L	L	I	H	Y	D	W	P	G	N
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.																		.	.	.															.
Template Conservation									.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.																		.	.	.															.
Template Sequence		I	C	N	E	R	N	L	.	.	.	.	.	.	.	.	P	K	M	R	P	F	D	R	V	C	L	D	I	Q	F	R	R	P	D	.	.	.	.	.	.	.	.	A	N	S	I	K	S	R	L	M	T	I	A	I	R	E	K	F	.	.	.	K	L	D	P	N	V	I	D	R	L	I	Q	T	T	.	R	G	D
Template Known Secondary structure				S		T	T	S	.	.	.	.	.	.	.	.	S	T	T	G	G	G	T	T	T	S										.	.	.	.	.	.	.	.																T		.	.	.				T	T									T	.	T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.																		.	.	.															.
Template SS confidence
		454	.	.	.	.	.	460									.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.									480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.				.	.	.	500	.	.	.	.	.	.	.	.	.	510		.	.	.
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	E	L	E	N	A	V	E	R	A	V	V	L	L	T	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	R	Q	V	I	N	L	L	S	T	I	S	T	T	T	K	T
Template Known Secondary structure										T						S	S
Template Predicted Secondary structure
Template SS confidence
		514	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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