Job Description P14375 Confidence 98.75% Date Thu Jan 5 11:33:59 GMT 2012 Rank 190 Aligned Residues 214 % Identity 25% Template c1iy2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent metalloprotease ftsh; PDBTitle: crystal structure of the ftsh atpase domain from thermus2 thermophilus Resolution 3.20 Å

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		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.											.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.
Query Sequence		P	A	V	T	A	S	Q	F	G	M	V	G	K	S	P	A	M	Q	H	L	L	S	E	I	A	L	V	.	.	.	.	.	.	.	.	.	.	A	P	S	E	A	T	V	L	I	H	G	D	S	G	T	G	K	E	L	V	A	R	A	I	H	A	S	S	A	R	S	E	K	P	L	V	T	L	N	C	A	A	L
Query Conservation																													.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.																													.	.	.										.	.	.
Template Conservation																																																																			.	.	.										.	.	.
Template Sequence		E	A	P	K	V	T	F	K	D	V	A	G	A	E	E	A	K	E	E	L	K	E	I	V	E	F	L	K	N	P	S	R	F	H	E	M	G	A	R	I	P	K	G	V	L	L	V	G	P	P	G	V	G	K	T	H	L	A	R	A	V	A	G	E	A	.	.	.	R	V	P	F	I	T	A	S	G	.	.	.
Template Known Secondary structure								G	G	G	S	S	S																								T	T													T	T	S	S												T	.	.	.	T									.	.	.
Template Predicted Secondary structure																																																																			.	.	.										.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.				.	.	.	.	.	.	220	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.							.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.
Query Sequence		N	E	S	L	L	E	S	E	L	F	G	H	E	K	G	A	F	T	G	A	D	K	R	R	E	G	R	F	V	E	A	D	G	G	T	L	F	L	D	E	I	G	D	I	.	.	.	.	.	.	S	P	M	M	Q	V	R	L	L	R	A	I	Q	E	R	E	V	Q	R	V	G	S	N	Q	I	I	S	V	D	V
Query Conservation																																														.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																							.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.																																																											.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	S	D	F	V	E	M	F	V	G	V	G	A	A	R	V	R	D	L	F	E	T	A	K	R	H	A	P	C	I	V	F	I	D	E	I	D	A	V	G	R	K	N	D	E	R	E	Q	T	L	N	Q	L	L	V	E	M	D	G	.	.	.	.	.	.	.	.	.	F	E	K	D	T	A	I
Template Known Secondary structure		.	.	.	.	.	.						S	T	T	T															T	S		S							T																							T	T	.	.	.	.	.	.	.	.	.			T	T
Template Predicted Secondary structure		.	.	.	.	.	.																																																											.	.	.	.	.	.	.	.	.
Template SS confidence
								223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280										.	.	.	.	.	.	.
		276	.	.	.	280	.	.	.	.				.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure											.	.	.
Query SS confidence											.	.	.
Query Sequence		R	L	I	A	A	T	H	R	D	.	.	.	L	A	A	E	V	N	A	G	R	F	R	Q	D	L	Y	Y	R	L	N	V	V	A	I	E	V	P	S	L	R	Q	R	R	E	D	I	P	L	L	A	G	H	F	L	Q	R	F	A	E	R	N	R	K	A	V	K	G	F	T	P	Q	A	M	D	L	L	I	H	Y
Query Conservation											.	.	.
Alig confidence											.	.	.													.	.	.	.	.	.	.														.	.	.	.								.	.	.	.	.	.	.	.																	.
Template Conservation																										.	.	.	.	.	.	.														.	.	.	.								.	.	.	.	.	.	.	.																	.
Template Sequence		V	V	M	A	A	T	N	R	P	D	I	L	D	P	A	L	L	R	P	G	R	F	D	R	.	.	.	.	.	.	.	Q	I	A	I	D	A	P	D	V	K	G	R	E	.	.	.	.	Q	I	L	R	I	H	A	.	.	.	.	.	.	.	.	R	G	K	P	L	A	E	D	V	D	L	A	L	L	A	K	.
Template Known Secondary structure								S		T	T	S	S						S	T	T	S	S			.	.	.	.	.	.	.														.	.	.	.								.	.	.	.	.	.	.	.	T	T	S		B		T	T									.
Template Predicted Secondary structure																										.	.	.	.	.	.	.														.	.	.	.								.	.	.	.	.	.	.	.																	.
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.								320	.	.	.	.	.	.	.	.	.	330	.	.					.	.	.	.	.	.	.									340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
		353	.	.	.		.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.				.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure						.																	.	.	.
Query SS confidence						.																	.	.	.
Query Sequence		D	W	P	G	.	N	I	R	E	L	E	N	A	V	E	R	A	V	V	L	L	.	.	.	T	G	E	Y	I	S	E	R	E	L	P	L	A	I
Query Conservation						.																	.	.	.
Alig confidence						.																	.	.	.
Template Conservation
Template Sequence		R	T	P	G	F	V	G	A	D	L	E	N	L	L	N	E	A	A	L	L	A	A	R	E	G	R	R	K	I	T	M	K	D	L	E	E	A	A
Template Known Secondary structure		T		T	T																				T	T			S	B									T
Template Predicted Secondary structure
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions