Return to main results Retrieve Phyre Job Id

Job DescriptionP23890
Confidence39.77%DateThu Jan 5 11:40:23 GMT 2012
Rank177Aligned Residues52
% Identity15%Templated3bwga1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain GntR-like transcriptional regulators
Resolution2.09

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   50......... 60... ......70... ......80.........90.........100...
Predicted Secondary structure 

.

.

....















Query SS confidence 









.



.









. . . .





























Query Sequence  RDELIDNVWK. RSIV. TNHVVTQSIS. . . . ELRKSLKDNDEDSPVYIATVPKRGYKLMVP
Query Conservation 
  
   

 .   
.    
   
 .... 

  
          
 
    

     
Alig confidence 









.



.









....











..















Template Conservation     
  
    
  


   

    


 


 

  
   ..
 
      
  
   
Template Sequence  ETYIEEHQLQQGDKLPVLETLXAQFEVSKSTITKSLELLEQK. . GAIFQVRGSGIFVRKH
Template Known Secondary structure  TT

TT
B


TT

T..TSTTT


Template Predicted Secondary structure 















..







Template SS confidence 



























































   12.......20.........30.........40.........50... ......60.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions