Job Description P23890 Confidence 98.93% Date Thu Jan 5 11:40:23 GMT 2012 Rank 98 Aligned Residues 169 % Identity 12% Template d1qqea_ SCOP info alpha-alpha superhelix TPR-like Tetratricopeptide repeat (TPR) Resolution 2.90

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		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.							.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.
Query Sequence		A	L	L	T	N	F	Y	Q	A	H	D	Y	L	L	H	G	D	D	K	S	L	N	R	A	S	E	L	L	G	E	I	V	Q	S	S	P	E	F	.	.	.	.	.	.	T	Y	A	R	A	E	K	A	L	V	D	I	V	R	H	S	Q	H	P	L	D	E	K	Q	L	A	A	L	N	T	E	I	D	N	I	V
Query Conservation																																								.	.	.	.	.	.
Alig confidence																		.	.																					.	.	.	.	.	.
Template Conservation																		.	.
Template Sequence		E	A	A	D	L	C	V	Q	A	A	T	I	Y	R	L	R	.	.	K	E	L	N	L	A	G	D	S	F	L	K	A	A	D	Y	Q	K	K	A	G	N	E	D	E	A	G	N	T	Y	V	E	A	Y	K	C	F	K	S	G	G	N	S	V	N	A	V	D	S	L	E	N	A	I	Q	I	F	T	H	R	G	Q
Template Known Secondary structure																	T	.	.	T		T																	T	T																			T	T																			T	T
Template Predicted Secondary structure																		.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.								.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.
Predicted Secondary structure																																								.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.
Query Sequence		T	L	P	E	L	N	N	L	S	I	I	Y	Q	I	K	A	V	S	A	L	V	K	G	K	T	D	E	S	Y	Q	A	I	N	T	G	I	D	L	.	.	.	.	.	.	.	E	M	S	W	L	N	Y	V	L	L	G	K	V	Y	E	M	K	G	M	N	R	E	A	A	D	A	Y	L	T	A	F	N	L	R	P
Query Conservation																																								.	.	.	.	.	.	.
Alig confidence						.	.	.																																.	.	.	.	.	.	.
Template Conservation						.	.	.
Template Sequence		F	R	R	G	.	.	.	A	N	F	K	F	E	L	G	E	I	L	E	N	D	L	H	D	Y	A	K	A	I	D	C	Y	E	L	A	G	E	W	Y	A	Q	D	Q	S	V	A	L	S	N	K	C	F	I	K	C	A	D	L	K	A	L	D	G	Q	Y	I	E	A	S	D	I	Y	S	K	L	I	K	S	S	M
Template Known Secondary structure						.	.	.														T	T																				T	T																			T	T															T	T	S
Template Predicted Secondary structure						.	.	.
Template SS confidence
		113	.	.	.				.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		482	.	.	.	.	.	.	.	490	.	.	.	.	.										.	.	.	.	500	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.
Query Sequence		G	A	N	T	L	Y	W	I	E	N	G	I	F	Q	.	.	.	.	.	.	.	.	.	T	S	V	P	Y	V	V	P	Y	L	D	K	F
Query Conservation																.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	N	R	L	S	Q	W	S	L	K	D	Y	F	L	K	K	G	L	C	Q	L	A	A	T	D	A	V	A	A	A	R	T	L	Q	E	G
Template Known Secondary structure		S		T	T	T	G	G	G															T	T											G	G
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions