 |
Job Description | P23890 | Confidence | 21.41% | Date | Thu Jan 5 11:40:23 GMT 2012 |
Rank | 198 | Aligned Residues | 105 |
% Identity | 10% | Template | d1b89a_ |
SCOP info | alpha-alpha superhelix
| ARM repeat
| Clathrin heavy chain proximal leg segment
|
Resolution | 2.60 |
|
 |
  |   |
376 | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | A | E | K | A | L | V | D | I | V | R | H | S | Q | H | P | L | D | E | K | Q | L | A | A | L | N | T | E | I | D | N | I | V | T | L | P | E | L | N | N | L | S | I | I | Y | Q | I | K | A | V | S | A | L | V | K | G | K | T | D | E | S | Y | Q | A | I | N | T | G | I | D | L | E | M | S | W | L | N | Y | V | L |
Query Conservation |   |
  |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|   |   |
|
|   |
|   |   |   |   |   |
|
|   |
|
|   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|
|
|
|   |
|   |   |
|
|
|   |   |   |   |   |   |
|
|   |   |   |   |
|   |
|
| . | . | . |
|   |   |
|   |
|   |   |
Template Sequence |   |
F | G | R | L | A | S | T | L | V | H | L | G | E | Y | Q | A | A | V | D | G | A | R | K | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | S | T | R | T | W | K | E | V | C | F | A | C | V | D | G | K | E | F | R | L | A | Q | X | C | G | L | H | I | V | . |
. |
. |
V | H | A | D | E | L | E | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  | T | T | T | T | T | T | . | . | . | T |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1224 | . | . | . | . | . | 1230 | . | . | . | . | . | . | . | . | . | 1240 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | 1250 | . | . | . | . | . | . | . | . | . | 1260 | . | . | . | . | . | . | . | . | . | 1270 | . | . | . | . | . | . | . | |
|
|
. | . | 1280 | . | . | . | . | . |
  |
  |   |
456 | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | G | K | V | Y | E | M | K | G | M | N | R | E | A | A | D | A | Y | L | T | A | F | N | L | R | P | G | A | N | T | L | Y | W | I | E | N | G | I | F | Q | T | S | V | P |
Query Conservation |   |
|
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|   |
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|
|   |   |
|   |   |   |
|
|
|   |
|
|
|   |   |
|   |   |   |
|
|
|   |
| . |   |
|
|
|
|   |
|
|
|
|
|
|   |
Template Sequence |   |
L | I | N | Y | Y | Q | D | R | G | Y | F | E | E | L | I | T | X | L | E | A | A | L | G | L | E | R | A | H | X | G | . |
X | F | T | E | L | A | I | L | Y | S | K | F | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |  | T | T | S | T | T |
|
|  |  | . |  |  |  |  |  |  |  |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1286 | . | . | . | 1290 | . | . | . | . | . | . | . | . | . | 1300 | . | . | . | . | . | . | . | . | . | 1310 | . | . | . | . | . | |
. | . | . | . | 1320 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|