Job Description P23890 Confidence 99.51% Date Thu Jan 5 11:40:23 GMT 2012 Rank 36 Aligned Residues 150 % Identity 9% Template c3urzB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a hypothetical protein (bacova_03105) from2 bacteroides ovatus atcc 8483 at 2.19 a resolution Resolution 2.19 Å

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		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.																	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	L	T	N	F	Y	Q	A	H	D	Y	L	L	H	G	D	D	K	S	L	N	R	A	S	E	L	L	G	E	I	V	Q	S	S	P	E	F	T	Y	A	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	A	L	V	D	I	V	R	H	S	Q	H	P	L	D	E	K	Q	L	A
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.
Template Sequence		S	V	D	E	X	L	Q	K	V	S	A	A	I	E	A	.	.	.	G	Q	N	G	Q	A	V	S	Y	F	R	Q	T	I	A	L	N	I	D	R	T	E	X	Y	Y	W	T	N	V	D	K	N	S	E	I	S	S	K	L	A	T	E	L	A	L	A	Y	K	K	N	R	N	Y	D	K	A	Y	L	F	Y	K	E
Template Known Secondary structure																T	.	.	.	T																												S		T	T	S	S																	T
Template Predicted Secondary structure																	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.				.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		399	400																								.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.		.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.		450	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.																										.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.																										.
Query Sequence		A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	E	I	D	N	I	V	T	L	P	E	L	N	N	L	S	I	I	Y	Q	I	K	A	.	V	S	A	L	V	K	G	K	T	D	E	S	Y	Q	A	I	N	T	G	I	D	L	E	M	S	.	W	L	N	Y
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.																										.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.																										.
Template Conservation
Template Sequence		L	L	Q	K	A	P	N	N	V	D	L	E	A	C	A	E	X	Q	V	C	R	G	Q	E	K	D	A	L	R	X	Y	E	K	I	L	Q	L	E	A	D	N	L	A	A	N	I	F	L	G	N	Y	Y	Y	L	T	A	E	Q	E	K	K	K	L	E	T	D	Y	K	K	L	S	S	P	T	K	X	Q	Y	A	R
Template Known Secondary structure						S	T	T														T	T																	T	T																													S		S
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		454	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	L	G	K	V	Y	E	M	K	G	M	N	R	E	A	A	D	A	Y	L	T	A	F	N	L	R	P	G	A	N	T	L	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	R	D	G	L	S	K	L	F	T	T	R	Y	E	K	A	R	N	S	L	Q	K	V	I	L	R	F	P	S	T	E	A	Q	K
Template Known Secondary structure													T															S
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions