Job Description P23890 Confidence 89.47% Date Thu Jan 5 11:40:23 GMT 2012 Rank 138 Aligned Residues 63 % Identity 16% Template c3k69A_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative transcription regulator; PDBTitle: crystal structure of a putative transcriptional regulator (lp_0360)2 from lactobacillus plantarum at 1.95 a resolution Resolution 1.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.
Query SS confidence																																																																		.	.
Query Sequence		L	I	D	L	L	V	F	F	A	Q	H	S	G	E	V	L	S	R	D	E	L	I	D	N	V	W	K	R	S	I	V	T	N	H	V	V	T	Q	S	I	S	E	L	R	K	S	L	K	D	N	D	E	D	S	P	V	Y	I	A	T	V	P	K	R	.	.	G	Y	K	L	M	V	P	V	I	W	Y	S
Query Conservation																																																																		.	.
Alig confidence																											.	.	.	.																		.	.	.	.	.	.	.	.	.										.	.
Template Conservation																											.	.	.	.																		.	.	.	.	.	.	.	.	.
Template Sequence		A	V	H	S	I	L	Y	L	D	A	H	R	D	S	K	V	A	S	R	E	L	A	Q	S	L	.	.	.	.	H	L	N	P	V	X	I	R	N	I	L	S	V	L	H	K	H	.	.	.	.	.	.	.	.	.	G	Y	L	T	G	T	V	G	K	N	G	G	Y	Q	L	D	L	A	L	A	D	X	N
Template Known Secondary structure											T	T	T	T	S		B										.	.	.	.	T	S		G	G	G	T										T	.	.	.	.	.	.	.	.	.	T	S	S					S	T	T							S		G	G	G	S	B
Template Predicted Secondary structure																											.	.	.	.																		.	.	.	.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.					.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.										.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions