Job Description P23890 Confidence 97.72% Date Thu Jan 5 11:40:23 GMT 2012 Rank 125 Aligned Residues 144 % Identity 7% Template c3e4bD_ PDB info PDB header:protein binding Chain: D: PDB Molecule:algk; PDBTitle: crystal structure of algk from pseudomonas fluorescens wcs374r Resolution 2.50 Å

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		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		R	M	Q	E	T	L	Q	K	I	L	P	H	R	G	A	L	L	T	N	F	Y	Q	A	H	D	Y	L	L	H	G	D	D	K	S	L	N	R	A	S	E	L	L	G	E	I	V	Q	S	S	P	E	F	T	Y	A	R	A	E	K	A	L	V	D	I	V	R	H	S	Q	H	P	L	D	E	K	Q	L	A	A	L
Query Conservation
Alig confidence																																																		.	.
Template Conservation																																																		.	.
Template Sequence		E	K	T	A	Q	A	L	L	E	K	I	A	P	G	Y	P	A	S	W	V	S	L	A	Q	L	L	Y	D	F	P	E	L	G	D	V	E	Q	M	M	K	Y	L	D	N	G	R	A	A	.	.	D	Q	P	R	A	E	L	L	L	G	K	L	Y	Y	E	G	K	W	V	P	A	D	A	K	A	A	E	A	H	F
Template Known Secondary structure													T	T	T	S	T														T	T	S																T	.	.	T																S	S	S
Template Predicted Secondary structure																																																		.	.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280			.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.					430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.					.	.	.	.	.	.	.	470	.	.
Predicted Secondary structure																															.	.	.	.																																		.	.	.	.
Query SS confidence																															.	.	.	.																																		.	.	.	.
Query Sequence		N	T	E	I	D	N	I	V	T	L	P	E	L	N	N	L	S	I	I	Y	Q	I	K	A	V	S	A	L	V	.	.	.	.	K	G	K	T	D	E	S	Y	Q	A	I	N	T	G	I	D	L	E	M	S	W	L	N	Y	V	L	L	G	K	V	Y	E	M	.	.	.	.	K	G	M	N	R	E	A	A	D	A
Query Conservation																															.	.	.	.																																		.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.																			.	.	.	.																		.																.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.																																								.
Template Sequence		E	K	.	.	.	.	.	.	.	.	.	A	V	G	R	E	V	A	A	D	Y	Y	L	G	Q	I	Y	R	R	G	Y	L	G	K	V	Y	P	Q	K	A	L	D	H	L	L	T	A	A	R	N	.	G	Q	N	S	A	D	F	A	I	A	Q	L	F	S	Q	G	K	G	T	K	P	D	P	L	N	A	Y	V	F
Template Known Secondary structure			T	.	.	.	.	.	.	.	.	.	T	T	T	T															T	T	T	S	S																T	.	T		T	T									T	T	S		T	T	S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.																																								.
Template SS confidence
		311	.										.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.		.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
		473	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	T	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Q	L	A
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		381	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions