Job Description P23890 Confidence 98.43% Date Thu Jan 5 11:40:23 GMT 2012 Rank 117 Aligned Residues 126 % Identity 28% Template c3ceqB_ PDB info PDB header:motor protein, transport protein Chain: B: PDB Molecule:kinesin light chain 2; PDBTitle: the tpr domain of human kinesin light chain 2 (hklc2) Resolution 2.75 Å

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		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure																	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	N	R	A	S	E	L	L	G	E	I	V	Q	S	S	.	P	E	F	T	Y	A	R	A	E	K	A	L	V	D	I	V	R	H	S	Q	H	P	L	D	E	K	Q	L	A	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	K	Q	A	L	E	D	L	E	K	T	S	G	H	D	H	P	D	V	A	T	M	L	N	I	L	A	L	V	Y	R	D	Q	N	K	Y	K	E	A	A	H	L	L	N	D	A	L	A	I	R	E	K	T	L	G	K	D	H	P	A	V	A	A	T	L	N	N	L	A	V	L	Y	G	K	R	G	K	Y	K	E
Template Known Secondary structure															S	S	S																	T	T																						T	T																			T
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	E	P	L	C	K	R	A	L	E	I	R	E	K	V	L	G	K	F	H	P	D	V	A	K	Q	L	S	N	L	A	L	L	C	Q	N	Q	G	K	A	E	E	V	E	Y	Y	Y	R	R	A	L	E	I	Y	A	T	R	L	G	P	D	D	P	N	V	A	K	T	K	N	N	L	A	S	C	Y	L	K	Q	G
Template Known Secondary structure																			T	T																	T	T	T																				S		T	T																			T
Template Predicted Secondary structure
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
														401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.							430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.		450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.																					.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.																					.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	N	T	E	I	D	N	I	V	T	L	P	E	L	N	N	L	S	I	I	Y	Q	I	K	A	V	S	A	L	V	.	.	.	.	.	.	K	G	K	T	D	E	S	Y	Q	A	I	N	T	G	I	D	L	E	M	S	.	W	L	N	Y	V	L	L	G	K	V	Y	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.																					.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.																					.
Template Conservation
Template Sequence		K	Y	Q	D	A	E	T	L	Y	K	E	I	L	T	R	A	H	E	K	E	F	G	S	V	N	G	D	N	K	P	I	W	M	H	A	E	E	R	E	E	S	K	D	K	R	R	D	S	A	P	Y	G	E	Y	G	S	W	Y	K	A	C	K	V	D	S	P	T	V	N	T	T	L	R	S	L	G	A	L	Y	R
Template Known Secondary structure																								S			S	S	S													T	T					S	S	S		S	S	S	T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	G	M	N	R	E	A	A	D	A	Y	L	T	A	F	N	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	Q	G	K	L	E	A	A	H	T	L	E	D	C	A	S	R	N	R
Template Known Secondary structure			T	T															T
Template Predicted Secondary structure
Template SS confidence
		461	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions