Job Description P23890 Confidence 46.43% Date Thu Jan 5 11:40:23 GMT 2012 Rank 166 Aligned Residues 52 % Identity 15% Template c3bwgA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:uncharacterized hth-type transcriptional regulator yydk; PDBTitle: the crystal structure of possible transcriptional regulator yydk from2 bacillus subtilis subsp. subtilis str. 168 Resolution 2.09 Å

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		50	.	.	.	.	.	.	.	.	.		60	.	.	.		.	.	.	.	.	.	70	.	.	.					.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure												.					.											.	.	.	.
Query SS confidence												.					.											.	.	.	.
Query Sequence		R	D	E	L	I	D	N	V	W	K	.	R	S	I	V	.	T	N	H	V	V	T	Q	S	I	S	.	.	.	.	E	L	R	K	S	L	K	D	N	D	E	D	S	P	V	Y	I	A	T	V	P	K	R	G	Y	K	L	M	V	P
Query Conservation												.					.											.	.	.	.
Alig confidence												.					.											.	.	.	.													.	.
Template Conservation																																												.	.
Template Sequence		E	T	Y	I	E	E	H	Q	L	Q	Q	G	D	K	L	P	V	L	E	T	L	X	A	Q	F	E	V	S	K	S	T	I	T	K	S	L	E	L	L	E	Q	K	.	.	G	A	I	F	Q	V	R	G	S	G	I	F	V	R	K	H
Template Known Secondary structure								T	T			T	T		B											T	T																T	.	.	T	S					T	T	T
Template Predicted Secondary structure																																												.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions