Job Description P23890 Confidence 99.28% Date Thu Jan 5 11:40:23 GMT 2012 Rank 61 Aligned Residues 160 % Identity 9% Template c2uy1A_ PDB info PDB header:rna-binding protein Chain: A: PDB Molecule:cleavage stimulation factor 77; PDBTitle: crystal structure of cstf-77 Resolution 2.0 Å

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		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400																				.	.	.	.	.	.	.	.	.	410	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	K	S	L	N	R	A	S	E	L	L	G	E	I	V	Q	S	S	P	E	F	T	Y	A	R	A	E	K	A	L	V	D	I	V	R	H	S	Q	H	P	L	D	E	K	Q	L	A	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	E	I	D	N	I	V	T	L	P	E
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	P	H	E	S	R	M	H	F	I	H	N	Y	I	L	D	S	F	Y	Y	A	E	E	V	Y	F	F	Y	S	E	Y	L	I	G	I	G	Q	K	E	K	A	K	K	V	V	E	R	G	I	E	M	S	D	G	M	F	L	S	L	Y	Y	G	L	V	M	D	E	E	A	V	Y	G	D	L	K	R	K	Y	S	F
Template Known Secondary structure																			T	T	T															T	T																		S	S										T	T		T										T
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		L	N	N	L	S	I	I	Y	Q	I	K	A	V	S	A	L	V	K	G	K	T	D	E	S	Y	Q	A	I	N	T	G	I	D	L	E	M	S	.	W	L	N	Y	V	L	L	G	K	V	Y	E	M	K	G	M	N	R	E	A	A	D	A	Y	L	T	A	F	N	L	R	P	G	A	N	T	L	Y	W	I	E	N
Query Conservation																																							.
Alig confidence																																							.
Template Conservation
Template Sequence		S	K	E	L	D	L	L	R	I	N	H	L	N	Y	V	L	K	K	R	G	L	E	L	F	R	K	L	F	I	E	L	G	N	E	G	V	G	P	H	V	F	I	Y	C	A	F	I	E	Y	Y	A	T	G	S	R	A	T	P	Y	N	I	F	S	S	G	L	L	K	H	P	D	S	T	L	L	K	E	E	F	F
Template Known Secondary structure																																	T	T	S																					S															T	T
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
		492	.	.	.			.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		G	I	F	Q	.	.	T	S	V	P	Y	V	V	P	Y	L	D	K	F	L	A	S
Query Conservation						.	.
Alig confidence						.	.
Template Conservation
Template Sequence		L	F	L	L	R	I	G	D	E	E	N	A	R	A	L	F	K	R	L	E	K	T
Template Known Secondary structure								T												S			B
Template Predicted Secondary structure
Template SS confidence
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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