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Job DescriptionP23890
Confidence99.60%DateThu Jan 5 11:40:23 GMT 2012
Rank24Aligned Residues164
% Identity15%Templatec2q7fA_
PDB info PDB header:protein bindingChain: A: PDB Molecule:yrrb protein; PDBTitle: crystal structure of yrrb: a tpr protein with an unusual peptide-2 binding site
Resolution2.49 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   324.....330.........340.........350.........360.........370.........380.........390.........400
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Query Sequence  ETLQKILPHRGALLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAAL. . .
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Template Sequence  TKAIEENKEDAIPYINFANLLSSV. . . . . NELERALAFYDKALELDSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAG
Template Known Secondary structure  TT
TT
T.....T

TT
TT
T
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   48.50.........60.........70. ........80.........90.........100.........110.........120..
 
   401........410.........420.........430.........440........ .450........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . NTEIDNIVTLPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEM. SWLNYVLLGK
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Template Sequence  MENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGV
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STS

TT
T


TT
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   123......130.........140.........150.........160.........170.........180.........190.........200..
 
   459460.........470.........480.........490..
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Query Sequence  VYEMKGMNREAADAYLTAFNLRPGANTLYWIENG
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Template Sequence  TYAYKENREKALEMLDKAIDIQPDHMLALHAKKL
Template Known Secondary structure  TT
TT
TT
T
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   203......210.........220.........230......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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