Job Description P23890 Confidence 99.79% Date Thu Jan 5 11:40:23 GMT 2012 Rank 14 Aligned Residues 99 % Identity 22% Template c2k4jA_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: arsr dna binding domain Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		M	Q	Q	P	V	V	R	V	G	E	W	L	V	T	P	S	I	N	Q	I	S	R	N	G	R	Q	L	T	L	E	P	R	L	I	D	L	L	V	F	F	A	Q	H	S	G	E	V	L	S	R	D	E	L	I	D	N	V	W	K	.	R	S	I	V	T	N	H	V	V	T	Q	S	I	S	E	L	R	K	S	L
Query Conservation																																																													.
Alig confidence							.																																																						.
Template Conservation							.
Template Sequence		V	S	E	P	G	.	D	A	N	I	F	R	V	D	K	D	S	R	E	V	Y	M	H	E	K	K	L	D	L	T	R	A	E	Y	E	I	L	S	L	L	I	S	K	K	G	Y	V	F	S	R	E	S	I	A	I	E	S	E	S	I	N	P	E	S	S	N	K	S	I	D	V	I	I	G	R	L	R	S	K	I
Template Known Secondary structure		T	T				.			T	T					T	T	T	T					T	T					S																												T			S	S		T	T
Template Predicted Secondary structure							.
Template SS confidence
		15	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	N	D	E	D	S	P	V	Y	I	A	T	V	P	K	R	G	Y	K	L	M
Query Conservation
Alig confidence								.
Template Conservation								.
Template Sequence		E	K	N	P	K	Q	.	P	Q	Y	I	I	S	V	R	G	I	G	Y	K	L	E
Template Known Secondary structure				S	S			.		S	S					T	T	T
Template Predicted Secondary structure								.
Template SS confidence
		94	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions