Return to main results Retrieve Phyre Job Id

Job DescriptionP23890
Confidence99.87%DateThu Jan 5 11:40:23 GMT 2012
Rank2Aligned Residues103
% Identity27%Templatec2jzyA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:transcriptional regulatory protein pcor; PDBTitle: solution structure of c-terminal effector domain of2 putative two-component-system response regulator involved3 in copper resistance from klebsiella pneumoniae
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60. ........70.........
Predicted Secondary structure 























.

Query SS confidence 




























































.

















Query Sequence  MQQPVVRVGEWLVTPSINQISRNGRQLTLEPRLIDLLVFFAQHSGEVLSRDELIDNVWKRS. IVTNHVVTQSISELRKSL
Query Conservation                     
        
      

  
         
  
   

   . 
    
   
  

  
Alig confidence 




























































.

















Template Conservation   
      
   

     
      
 

  
  

  
    
  

   
   

          
   
 


 

Template Sequence  MAATVCTIADMTVDMVRRTVIRSGKKIHLTGKEYVLLELLLQRTGEVLPRSLISSLVWNMNFDSDTNVIDVAVRRLRSKI
Template Known Secondary structure 




TT
TTT

TT



TTTS
B
T


SS
STTTTT
Template Predicted Secondary structure 


























Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   80.........90.........100.....
Predicted Secondary structure 

















Query SS confidence 

























Query Sequence  KDNDEDSPVYIATVPKRGYKLMVPVI
Query Conservation            
 
    

       
Alig confidence 




..


















Template Conservation       ..   
 

 
 

 
    
Template Sequence  DDDFE. . PKLIHTVRGAGYVLEIREE
Template Known Secondary structure  TTTSS..




TTT
B

S

Template Predicted Secondary structure 




..









Template SS confidence 

























   81.... ....90.........100....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions