|   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | |
. | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
| . |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | Q | Q | P | V | V | R | V | G | E | W | L | V | T | P | S | I | N | Q | I | S | R | N | G | R | Q | L | T | L | E | P | R | L | I | D | L | L | V | F | F | A | Q | H | S | G | E | V | L | S | R | D | E | L | I | D | N | V | W | K | R | S | . |
I | V | T | N | H | V | V | T | Q | S | I | S | E | L | R | K | S | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |   |   | . |   |
|   |   |   |   |
|   |   |   |
|   |   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |
|   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|
|   |
|
|
Template Sequence |   |
M | A | A | T | V | C | T | I | A | D | M | T | V | D | M | V | R | R | T | V | I | R | S | G | K | K | I | H | L | T | G | K | E | Y | V | L | L | E | L | L | L | Q | R | T | G | E | V | L | P | R | S | L | I | S | S | L | V | W | N | M | N | F | D | S | D | T | N | V | I | D | V | A | V | R | R | L | R | S | K | I |
Template Known Secondary structure |   |
|
|
|
|
|  |  |  | T | T |  |  |  |
| T | T | T |
|
|  |  |  | T | T |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S |
| B |
|  |  |  |  |  |  |  |  | T |
|
|
| S | S |
| S | T | T |  |  |  |  |  |  |  |  |  |  | T | T | T |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | D | N | D | E | D | S | P | V | Y | I | A | T | V | P | K | R | G | Y | K | L | M | V | P | V | I |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   | . | . |   |   |   |
|   |
|
|   |
|   |
|
|   |
|   |   |   |   |
|
Template Sequence |   |
D | D | D | F | E | . |
. |
P | K | L | I | H | T | V | R | G | A | G | Y | V | L | E | I | R | E | E |
Template Known Secondary structure |   |
T | T | T | S | S | . | . |
|
|
|  |  |
|
| T | T | T |
| B |  |  |
|
| S |
|
|
Template Predicted Secondary structure |   |
|
|
|
|
| . | . |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
81 | . | . | . | . | |
|
. | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . |
  |