Job Description P23890 Confidence 99.85% Date Thu Jan 5 11:40:23 GMT 2012 Rank 7 Aligned Residues 97 % Identity 28% Template c2hwvA_ PDB info PDB header:transcription Chain: A: PDB Molecule:dna-binding response regulator vicr; PDBTitle: crystal structure of an essential response regulator dna binding2 domain, vicrc in enterococcus faecalis, a member of the yycf3 subfamily. Resolution 1.90 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		V	R	V	G	E	W	L	V	T	P	S	I	N	Q	I	S	R	N	G	R	Q	L	T	L	E	P	R	L	I	D	L	L	V	F	F	A	Q	H	S	G	E	V	L	S	R	D	E	L	I	D	N	V	W	K	.	R	S	I	V	T	N	H	V	V	T	Q	S	I	S	E	L	R	K	S	L	K	D	N	D	E
Query Conservation																																																								.
Alig confidence																																																								.
Template Conservation
Template Sequence		M	T	I	G	D	L	T	I	H	P	D	A	Y	M	V	S	K	R	G	E	K	I	E	L	T	H	R	E	F	E	L	L	Y	Y	L	A	K	H	I	G	Q	V	M	T	R	E	H	L	L	Q	T	V	W	G	Y	D	Y	F	G	D	V	R	T	V	D	V	T	V	R	R	L	R	E	K	I	E	D	S	P	S
Template Known Secondary structure					T	T					S	S	S	S					T	T																			T	T	T			B										T		G	G	G	T	T																		S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	P	V	Y	I	A	T	V	P	K	R	G	Y	K	L	M	V	P
Query Conservation
Alig confidence			.
Template Conservation			.
Template Sequence		H	.	P	T	Y	L	V	T	R	R	G	V	G	Y	Y	L	R	N	P
Template Known Secondary structure		S	.		S	S					T	T	T
Template Predicted Secondary structure			.
Template SS confidence
		214		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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