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Job DescriptionP23890
Confidence99.33%DateThu Jan 5 11:40:23 GMT 2012
Rank52Aligned Residues101
% Identity16%Templatec2c2lD_
PDB info PDB header:chaperoneChain: D: PDB Molecule:carboxy terminus of hsp70-interacting protein; PDBTitle: crystal structure of the chip u-box e3 ubiquitin ligase
Resolution3.3 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   373......380.........390.........400.........410.........420.........430.........440........ .450.
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Query Sequence  TYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEM. SWL
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Template Sequence  AQELKEQGNRLFVGRKYPEAAACYGRAIT. . . . . . . . . . RNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVK
Template Known Secondary structure  TTT
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TT
TTT


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   27..30.........40.........50..... ....60.........70.........80.........90......
 
   452.......460.........470.........480...
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Query Sequence  NYVLLGKVYEMKGMNREAADAYLTAFNLRPGA
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Template Sequence  AHFFLGQCQLEMESYDEAIANLQRAYSLAKEQ
Template Known Secondary structure  TTTTT
T
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   97..100.........110.........120........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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