Return to main results Retrieve Phyre Job Id

Job DescriptionP23890
Confidence99.00%DateThu Jan 5 11:40:23 GMT 2012
Rank89Aligned Residues81
% Identity20%Templatec1na3A_
PDB info PDB header:de novo proteinChain: A: PDB Molecule:designed protein ctpr2; PDBTitle: design of stable alpha-helical arrays from an idealized tpr2 motif
Resolution1.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   415....420.........430.........440........ .450.........460.........470.........480.........490...
Predicted Secondary structure 







.









Query SS confidence 

































.












































Query Sequence  NLSIIYQIKAVSALVKGKTDESYQAINTGIDLEM. SWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANTLYWIENGI
Query Conservation          

          

      
     .       

      
    
   
 


 
 
          
 
Alig confidence 

































.












































Template Conservation 
 
      
           
      

   
         
           
      

 
 
        

  
Template Sequence  NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNA
Template Known Secondary structure  TT

TT
TT

TT
Template Predicted Secondary structure 












Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   494.
Predicted Secondary structure 
Query SS confidence 

Query Sequence  FQ
Query Conservation 
 
Alig confidence 

Template Conservation    
Template Sequence  KQ
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 

   82.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions