Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9E2
Confidence32.26%DateThu Jan 5 11:09:59 GMT 2012
Rank496Aligned Residues41
% Identity17%Templatec3mkzU_
PDB info PDB header:dna-binding protein/dnaChain: U: PDB Molecule:protein sopb; PDBTitle: structure of sopb(155-272)-18mer complex, p21 form
Resolution2.98 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40...
Predicted Secondary structure 











Query SS confidence 










































Query Sequence  MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFR
Query Conservation   
    
  
   
        

  

     
   
 
 
 
Alig confidence 

















..






















Template Conservation   
  
 
  
   
    ..  

  

   
 


 


 

Template Sequence  TSAYERGQRYASRLQNEF. . AGNISALADAENISRKIITRCIN
Template Known Secondary structure 

..TT
TTT

Template Predicted Secondary structure 



..





Template SS confidence 










































   158.160.........170..... ....180.........190........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions