Job Description P0A9E2 Confidence 90.04% Date Thu Jan 5 11:09:59 GMT 2012 Rank 169 Aligned Residues 99 % Identity 9% Template c2zcmB_ PDB info PDB header:transcription Chain: B: PDB Molecule:biofilm operon icaabcd hth-type negative transcriptional PDBTitle: crystal structure of icar, a repressor of the tetr family Resolution 1.33 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	H	Q	K	I	I	Q	D	L	I	A	W	I	D	E	H	I	D	Q	P	L	N	I	D	V	V	A	K	K	S	G	Y	S	K	W	Y	L	Q	R	M	F	R	T	V	T	H	Q	T	L	G	D	Y	I	R	Q	R	R	L	L	L	A	A	V	E	L	R	T	T	E	R	P	I	F	D	I	A	M	D	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	K	D	K	I	I	D	N	A	I	T	L	F	S	E	K	G	Y	D	G	T	T	L	D	D	I	S	K	S	V	N	I	K	K	A	S	L	Y	Y	H	Y	D	N	K	E	E	I	Y	R	K	S	V	E	N	C	F	N	Y	F	I	D	F	X	X	R	N	Y	S	I	D	G	L	Y	Q	F	L	F	K	F	I
Template Known Secondary structure																			T	T	T										T	T			G	G	G	G	G	G	T		S	S																						T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	V	S	Q	Q	T	F	S	R	V	F	R	R	Q	F	D	R	T	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	D	V	D	E	R	Y	I	K	L	Y	V	Q	L	S	S	A	P	E
Template Known Secondary structure				S										G	G	G	G	S		G
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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