Job Description P0A9E2 Confidence 39.19% Date Thu Jan 5 11:09:59 GMT 2012 Rank 459 Aligned Residues 40 % Identity 8% Template c2o8kA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:rna polymerase sigma factor rpon; PDBTitle: nmr structure of the sigma-54 rpon domain bound to the-242 promoter element Resolution UNK

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.						.	.	.	.	.	.	.	.	40
Predicted Secondary structure																.																		.	.	.	.	.
Query SS confidence																.																		.	.	.	.	.
Query Sequence		M	S	H	Q	K	I	I	Q	D	L	I	A	W	I	.	D	E	H	I	D	Q	P	L	N	I	D	V	V	A	K	K	S	.	.	.	.	.	G	Y	S	K	W	Y	L	Q	R
Query Conservation																.																		.	.	.	.	.
Alig confidence																.																		.	.	.	.	.
Template Conservation
Template Sequence		L	T	Q	G	E	L	M	K	L	I	K	E	I	V	E	N	E	D	K	R	K	P	Y	S	D	Q	E	I	A	N	I	L	K	E	K	G	F	K	V	A	R	R	T	V	A	K
Template Known Secondary structure		S		S	S	T	T									T	T	S		T	T	S															T
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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