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Job DescriptionP0CE48
Confidence99.64%DateThu Jan 5 11:30:16 GMT 2012
Rank87Aligned Residues172
% Identity20%Templatec3nxsA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:lao/ao transport system atpase; PDBTitle: crystal structure of lao/ao transport system from mycobacterium2 smegmatis bound to gdp
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  KEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAARAFDQIDNAPEEKARGITINTSHVEYDTPTRHYAHVDC
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Template Sequence  LDLMPEAGSAMHVGITGVPGVGKSTTIEALGMHLIEAGHRVA. . . . . . . . . . . . . . . VLAVDRMARLAVHPDAYIRPSPT
Template Known Secondary structure  TTTTTT
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   45....50.........60.........70.........80...... ...90.........100.........
 
   83......90..... ....100.........110.........120.........130.....
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Query Sequence  PGHADYVKNMITG. . . . . . . . . . . . . . . . . . . . . . . . . . . AAQMDGAILVVAATDGPMPQTREHILLGRQVGVPYIIVFL
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Template Sequence  SGTLGGVAKATRETIVLLEAAGYDVILVETVGVGQSEVTVAGMVDTFVFLTLARTGDQLQGIK. . . . . KGVLELADVIVV
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   125....130.........140.........150.........160.........170.........180....... ..190.........
 
   136...140.........150.........160...... ...170.........180.........190....
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Query Sequence  NKCDMVDDEELLELVEMEVRELLSQYDFPGD. DTPIVRGSALKALEGDAEWEAKILELAG
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Template Sequence  NKADGEHAVEAKAAARELSGAIRLIYPRESLWRPPVLTMSAVEGTGLPELWETVLRHREV
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   200.........210.........220.........230.........240.........250.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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