Job Description P0CE48 Confidence 98.81% Date Thu Jan 5 11:30:16 GMT 2012 Rank 242 Aligned Residues 156 % Identity 12% Template c3l82B_ PDB info PDB header:cell cycle Chain: B: PDB Molecule:f-box only protein 4; PDBTitle: x-ray crystal structure of trf1 and fbx4 complex Resolution 2.40 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	H	V	N	V	G	T	I	G	H	V	D	H	G	K	T	T	L	T	A	A	I	T	T	V	L	A	K	T	Y	G	G	A	A	R	A	F	D	Q	I	D	N	A	P	E	E	K	A	R	G	I	T	I	N	T	S	H	V	E	Y	D	T	P	T	R	H	Y	A	H	V	D	C	P	G	H	A	D	Y	V
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Sequence		Q	N	E	P	R	F	A	X	F	G	P	G	L	E	E	L	N	T	S	L	V	L	S	L	X	S	S	E	E	L	C	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	G	L	P	Q	R	Q	I	D	G	I	G	S	G	V	N	F	.	Q	L	N	N	Q	H	K	F	N
Template Known Secondary structure												G	G	G	T	S	S	S	S								T			S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					G	G	G			T	T	S							.		S	S	S	S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.																					.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.
									90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.								.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																							.														.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.																							.														.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	K	N	M	I	T	G	A	A	Q	M	D	G	A	I	L	V	V	A	A	T	D	G	.	P	M	P	Q	T	R	E	H	I	L	L	G	R	.	.	.	.	.	.	.	Q	V	G	V	P	Y	I	I	V	F	L	N	K	C	D	M	V	D	D	E	E	L	L	E	L	V	E	M	E	V
Query Conservation		.	.	.	.	.	.	.																							.														.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																							.														.	.	.	.	.	.	.																						.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.
Template Sequence		I	L	I	L	Y	S	T	P	Q	I	Q	K	V	C	E	V	V	D	G	F	I	Y	V	A	N	A	E	A	H	K	R	H	E	W	Q	D	E	F	S	H	I	X	A	X	T	D	P	A	F	G	S	S	G	R	P	L	L	V	L	S	C	I	S	Q	G	D	V	K	R	X	P	.	.	.	.	.	C	F	Y	L
Template Known Secondary structure						S													S									B	T	T																S		T	T	S	S		S		S									S	S	T	T	S		B			.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.						.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	L	L	S	Q	Y	D	F	P	G	D	D	T	P	I	V	R	G	S	A	L	K	A	L	E	G	D	A	E	W	E	A	K	I	L	E	L
Query Conservation
Alig confidence											.
Template Conservation											.
Template Sequence		A	H	E	L	H	L	N	L	L	.	N	H	P	W	L	V	Q	D	T	E	A	E	T	L	T	G	F	L	N	G	I	E	W	I	L	E	E	V
Template Known Secondary structure					T	T	G	G	G	G	.		S									T	T	T		T	T									T	T	T	T
Template Predicted Secondary structure											.
Template SS confidence
		345	.	.	.	.	350	.	.	.		.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions