|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | K | E | K | F | E | R | T | K | P | H | V | N | V | G | T | I | G | H | V | D | H | G | K | T | T | L | T | A | A | I | T | T | V | L | A | K | T | Y | G | G | A | A | R | A | F | D | Q | I | D | N | A | P | E | E | K | A | R | G | I | T | I | N | T | S | H | V | E | Y | D | T | P | T | R | H | Y | A | H | V | D |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |
|   |
|   |
|   |
|
|
|
|   |
|
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |
|   |   |
|   |
|
|
|   |
|
|
|
|
|
|
|
|
|
|   |
|   |
|   |   |   |
|
|
|
|   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|
Template Sequence |   |
T | K | D | K | G | E | L | L | R | T | G | L | K | V | A | I | V | G | R | P | N | V | G | K | S | S | L | L | N | A | W | S | Q | S | D | R | A | I | V | T | D | L | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | T | T | R | D | V | V | E | S | Q | L | V | V | G | G | I | P | V | Q | V | L | D |
Template Known Secondary structure |   |
T |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |
| T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  | B | S |
|
| S |
|
| T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T |
|
|  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
211 | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . |
  |
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
C | P | G | H | A | D | Y | V | K | N | M | I | T | G | A | A | Q | M | D | G | A | I | L | V | V | A | A | T | D | G | P | M | P | Q | T | R | E | H | I | L | L | G | R | Q | V | G | V | P | Y | I | I | V | F | L | N | K | C | D | M | V | D | D | E | E | L | L | E | L | V | E | M | E | V | R | E | L | L | S | Q | Y |
Query Conservation |   |
  |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|   |
|   |   |
|   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |
|   |   |   |   |
|
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
Template Conservation |   |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|
|
|
|
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |
|   |
|   |
|
|   |
|
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
Template Sequence |   |
Q | A | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | T | A | D | L | V | L | L | T | I | D | A | A | T | G | W | T | T | G | D | Q | E | I | Y | E | Q | V | K | . |
. |
. |
H | R | P | L | I | L | V | M | N | K | I | D | L | V | E | K | Q | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | T | S | L |
Template Known Secondary structure |   |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
| S |
| S |  |  |  |  |  |  |  | T | T | T |
| S |
|  |  |  |  |  |  |  |  |  |  | T | . | . | . | T | S |
|  |  |  |  |  |  |
| T | T | S | S |
| G | G | G | . | . | . | . | . | . | . | . | . | . | . | . | S | T | T |
|
Template Predicted Secondary structure |   |
|
|  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| . | . | . |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
296 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | |
|
|
. | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . |
  |
  |   |
162 | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | F | P | G | D | D | T | P | I | V | R | G | S | A | L | K | A | L | E | G | D | A | E | W | E | A | K | I | L | E | L |
Query Conservation |   |
  |   |   |   |   |   |
|   |
|
|
|
|
|
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|
|   |
|
|
|   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |
|
Template Sequence |   |
E | Y | P | E | N | I | T | Q | I | V | H | T | A | A | A | Q | K | Q | G | I | D | S | L | E | T | A | I | L | E | I | V |
Template Known Secondary structure |   |
|
|
| T | T |
|
|
|  |  |  |  | B | T | T | T | T | B | S |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
349 | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . |
  |