Job Description P0CE48 Confidence 100.00% Date Thu Jan 5 11:30:16 GMT 2012 Rank 34 Aligned Residues 175 % Identity 25% Template c3e20A_ PDB info PDB header:translation Chain: A: PDB Molecule:eukaryotic peptide chain release factor gtp-binding PDBTitle: crystal structure of s.pombe erf1/erf3 complex Resolution 3.50 Å

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		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		K	P	F	L	L	P	I	E	D	V	F	S	I	S	G	R	G	T	V	V	T	G	R	V	E	R	G	I	I	K	V	G	E	E	V	E	I	V	G	I	K	E	T	Q	K	S	T	C	T	G	V	E	M	.	F	R	K	L	L	D	E	G	R	A	G	E	N	V	G	V	L	L	R	G	I	K	R	E	E	I
Query Conservation																																																							.
Alig confidence														.	.																									.	.														.																					.
Template Conservation														.	.																									.	.																																			.
Template Sequence		A	P	F	I	M	P	I	A	S	K	Y	K	.	.	D	L	G	T	I	L	E	G	K	I	E	A	G	S	I	K	K	N	S	N	V	L	V	M	.	.	P	I	N	Q	T	L	E	V	T	A	I	Y	D	E	A	D	E	E	I	S	S	S	I	C	G	D	Q	V	R	L	R	V	R	G	.	D	D	S	D	V
Template Known Secondary structure														.	.	S	S	S									B	S				S	S							.	.	T	T	T											T	T	S				S				T	T									S	.			T	T
Template Predicted Secondary structure														.	.																									.	.																																			.
Template SS confidence
		467	.	.	470	.	.	.	.	.	.	.	.			.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.			.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.		.	.	.	540	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.		.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.													.	.	.	350	.	.	.	.
Predicted Secondary structure																.																																														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.																																														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	R	G	Q	V	L	A	K	P	G	T	I	K	P	.	H	T	K	F	E	S	E	V	Y	I	L	S	K	D	E	G	G	R	H	T	P	F	F	K	G	Y	R	P	Q	F	Y	F	R	T	T	D	V	T	G	T	I	E	L	P	E	.	.	.	.	.	.	.	.	.	.	.	.	G	V	E	M	V	M	P	G
Query Conservation																.																																														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.													.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.
Template Sequence		Q	T	G	Y	V	L	T	S	T	K	N	P	V	H	A	T	T	R	F	I	A	Q	I	A	I	L	E	.	.	.	.	.	L	P	S	I	L	T	T	G	Y	S	C	V	M	H	I	H	T	A	V	E	E	V	S	F	A	K	L	L	H	K	L	D	K	T	N	R	K	S	K	K	P	P	M	F	A	T	K	G
Template Known Secondary structure			T	T						S	S	S																S	.	.	.	.	.		S	S		B		T	T								S	S																T	T					S	S			S		B		T	T
Template Predicted Secondary structure																													.	.	.	.	.
Template SS confidence
		542	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.						.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.							.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.
Query Sequence		D	N	I	K	M	V	V	T	L	I	H	P	I	A	M	D	D	G	L	.	.	.	.	.	.	R	F	A	I	R	E	G	G	R	T	V	G	A	G	V	V	A	K	V	L
Query Conservation																					.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.
Template Conservation
Template Sequence		M	K	I	I	A	E	L	E	T	Q	T	P	V	C	M	E	R	F	E	D	Y	Q	Y	M	G	R	F	T	L	R	D	Q	G	T	T	V	A	V	G	K	V	V	K	I	L
Template Known Secondary structure																			T	T	T												T	T
Template Predicted Secondary structure
Template SS confidence
		617	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions