Job Description P0CE48 Confidence 99.68% Date Thu Jan 5 11:30:16 GMT 2012 Rank 83 Aligned Residues 149 % Identity 19% Template c3a1vB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:iron(ii) transport protein b; PDBTitle: crystal structue of the cytosolic domain of t. maritima feob2 iron iransporter in apo form Resolution 2.40 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		V	N	V	G	T	I	G	H	V	D	H	G	K	T	T	L	T	A	A	I	T	T	V	L	A	K	T	Y	G	G	A	A	R	A	F	D	Q	I	D	N	A	P	E	E	K	A	R	G	I	T	I	N	T	S	H	V	E	Y	D	T	P	T	R	H	Y	A	H	V	D	C	P	G	H	A	D	Y	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.																					.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Sequence		V	K	V	A	L	A	G	C	P	N	V	G	K	T	S	L	F	N	A	L	T	G	T	K	Q	Y	V	A	N	W	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	T	V	E	K	K	E	.	V	F	T	Y	K	G	Y	T	I	N	L	I	D	L	P	G	T	Y	S	L	G	Y	S	S
Template Known Secondary structure										T	T	S	S										T	T							S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S		S					.					T	T												S	S			S	S	S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.																	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
				89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	V	K	N	M	I	T	G	A	A	Q	M	D	G	A	I	L	V	V	A	A	T	D	G	P	M	P	Q	T	R	E	H	I	L	L	G	R	Q	V	G	V	P	Y	I	I	V	F	L	N	K	C	D	M	V	D	D	E	E	L	L	E	L	V	E	M	E	V	R	E	L	L	S	Q	Y	D	F	P	G	D
Query Conservation		.	.
Alig confidence		.	.																																									.																.	.	.	.	.	.									.	.	.	.	.	.	.	.
Template Conservation																																												.																.	.	.	.	.	.									.	.	.	.	.	.	.	.
Template Sequence		I	D	E	K	I	A	R	D	Y	L	L	K	G	D	A	D	L	V	I	L	V	A	D	S	V	N	P	E	Q	S	L	Y	L	L	L	E	I	L	E	M	E	K	.	K	V	I	L	A	M	T	K	K	T	G	M	K	I	D	.	.	.	.	.	.	R	Y	E	L	Q	K	H	L	.	.	.	.	.	.	.	.
Template Known Secondary structure														S			S								T	T														T	T			.									T	T						.	.	.	.	.	.									.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																												.																.	.	.	.	.	.									.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.							.	.	140	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	P	I	V	R	G	S	A	L	K	A	L	E	G	D	A	E	W	E	A	K	I	L	E	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	P	V	V	F	T	S	S	V	T	G	E	G	L	E	E	L	K	E	K	I	V	E	Y	A	Q
Template Known Secondary structure			S							T	T	T			S
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions