Job Description P0CE48 Confidence 98.20% Date Thu Jan 5 11:30:16 GMT 2012 Rank 295 Aligned Residues 128 % Identity 13% Template c2yc2D_ PDB info PDB header:transport protein Chain: D: PDB Molecule:small rab-related gtpase; PDBTitle: intraflagellar transport complex 25-27 from chlamydomonas Resolution 2.59 Å

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		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.					.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.							.	.	.	.	.
Predicted Secondary structure																	.	.	.	.																																																			.	.	.	.	.	.
Query SS confidence																	.	.	.	.																																																			.	.	.	.	.	.
Query Sequence		G	I	T	I	N	T	S	H	V	E	Y	D	T	P	T	.	.	.	.	R	H	Y	A	H	V	D	C	P	G	H	A	D	Y	V	K	N	M	I	T	G	A	A	Q	M	D	G	A	I	L	V	V	A	A	T	D	G	P	M	P	Q	T	R	E	H	I	L	L	G	R	.	.	.	.	.	.	Q	V	G	V	P
Query Conservation																	.	.	.	.																																																			.	.	.	.	.	.
Alig confidence																	.	.	.	.																																																			.	.	.	.	.	.
Template Conservation
Template Sequence		R	C	K	V	A	V	V	V	A	P	V	T	I	P	D	T	T	V	S	V	E	L	F	L	L	D	T	A	G	S	D	L	Y	K	E	Q	I	S	Q	Y	W	N	G	V	Y	Y	A	I	L	V	F	D	V	S	S	M	E	S	F	E	S	C	K	A	W	F	E	L	L	K	S	A	R	P	D	R	E	R	P	L
Template Known Secondary structure															T	T	S	S										T	T	T	T								S	T	T													T	T																				S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.			.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																																																			.	.
Query SS confidence																																																			.	.
Query Sequence		Y	I	I	V	F	L	N	K	C	D	M	V	D	D	E	E	L	L	E	L	V	E	M	E	V	R	E	L	L	S	Q	Y	D	F	P	G	D	D	T	P	I	V	R	G	S	A	L	K	A	.	.	L	E	G	D	A	E	W	E	A	K	I	L	E	L	A	G	F	L	D	S	Y	I	P
Query Conservation																																																			.	.
Alig confidence														.	.	.	.	.	.	.	.	.												.	.	.	.	.													.	.
Template Conservation														.	.	.	.	.	.	.	.	.												.	.	.	.	.
Template Sequence		R	A	V	L	V	A	N	K	T	Q	V	R	.	.	.	.	.	.	.	.	.	L	D	M	A	Q	D	W	A	T	T	N	.	.	.	.	.	T	L	D	F	F	D	V	S	A	A	D	A	P	F	L	S	I	A	T	T	F	Y	R	N	Y	E	D	K	V	A	A	F	Q	D	A	C	R
Template Known Secondary structure														.	.	.	.	.	.	.	.	.												.	.	.	.	.	T																																			T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.												.	.	.	.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.										.	.	.	.	.	.	.	.	150	.	.						.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions