Job Description P0CE48 Confidence 99.70% Date Thu Jan 5 11:30:16 GMT 2012 Rank 79 Aligned Residues 169 % Identity 12% Template c2xtpA_ PDB info PDB header:immune system Chain: A: PDB Molecule:gtpase imap family member 2; PDBTitle: crystal structure of nucleotide-free human gimap2, amino2 acid residues 1-260 Resolution 1.50 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		H	V	N	V	G	T	I	G	H	V	D	H	G	K	T	T	L	T	A	A	I	T	T	V	L	A	K	T	Y	G	G	A	A	R	A	F	D	Q	I	D	N	A	P	E	E	K	A	R	G	I	T	I	N	T	S	H	V	E	Y	D	T	P	T	R	H	Y	A	H	V	D	C	P	G	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	R	I	I	L	V	G	K	T	G	T	G	K	S	A	A	G	N	S	I	L	R	K	Q	A	F	E	S	K	L	G	S	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	T	K	T	C	S	K	S	Q	G	S	W	G	N	R	E	I	V	I	I	D	T	P	D	X	F	S	W	K	D	H
Template Known Secondary structure											T	T	S											T	S			S				T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.					S									T	T										G	G	G	G	S	S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.															.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
						85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.				.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.					.
Predicted Secondary structure		.	.	.	.																																												.	.	.																										.	.	.	.
Query SS confidence		.	.	.	.																																												.	.	.																										.	.	.	.
Query Sequence		.	.	.	.	H	A	D	Y	V	K	N	M	I	T	G	A	A	Q	M	D	G	A	I	L	V	V	A	A	T	D	G	P	M	P	Q	T	R	E	H	I	L	L	G	R	Q	V	G	.	.	.	V	P	Y	I	I	V	F	L	N	K	C	D	M	V	D	D	E	E	L	L	E	L	V	E	M	.	.	.	.	E
Query Conservation		.	.	.	.																																												.	.	.																										.	.	.	.
Alig confidence		.	.	.	.																																												.	.	.																										.	.	.	.
Template Conservation
Template Sequence		C	E	A	L	Y	K	E	V	Q	R	C	Y	L	L	S	A	P	G	P	H	V	L	L	L	V	T	Q	L	G	R	Y	T	S	Q	D	Q	Q	A	A	Q	R	V	K	E	I	F	G	E	D	A	X	G	H	T	I	V	L	F	T	H	K	E	D	L	N	G	G	S	L	X	D	Y	X	H	D	S	D	N	K	A
Template Known Secondary structure																	T	T			S								T	T																			G	G	G	G	G	G								G	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	E	L	L	S	Q	Y	D	F	P	G	D	D	T	P	I	V	R	G	S	A	L	K	A	L	E	G	D	A	E	W	E	A	K	I	L	E	L	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	K	L	V	A	A	C	G	G	R	I	C	A	F	N	N	R	A	E	G	S	N	Q	D	D	Q	V	K	E	L	X	D	C	I	E	D	L	L	X	E
Template Known Secondary structure									T	T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions