Job Description P0CE48 Confidence 99.22% Date Thu Jan 5 11:30:16 GMT 2012 Rank 158 Aligned Residues 163 % Identity 13% Template c2rexD_ PDB info PDB header:signaling protein/lipoprotein Chain: D: PDB Molecule:rho-related gtp-binding protein rho6; PDBTitle: crystal structure of the effector domain of plxnb1 bound with rnd12 gtpase Resolution 2.30 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	V	N	V	G	T	I	G	H	V	D	H	G	K	T	T	L	T	A	A	I	T	T	V	L	A	K	T	Y	G	G	A	A	R	A	F	D	Q	I	D	N	A	P	E	E	K	A	R	G	I	T	I	N	T	S	H	V	E	Y	D	T	P	T	R	H	Y	A	H	V	D	C	P	G	H	A	D	Y	V	K	N
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	C	K	L	V	L	V	G	D	V	Q	C	G	K	T	A	M	L	Q	V	L	A	K	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	Y	P	E	T	Y	V	P	T	V	F	E	N	Y	T	A	C	L	E	T	E	E	Q	R	V	E	L	S	L	W	D	T	S	G	S	P	Y	Y	D	N	V
Template Known Secondary structure										S	T	T	S	S											S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S					S											S	S													S	G	G	G	T	T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.																.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.										.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																					.																											.	.	.	.	.	.	.	.	.
Query SS confidence																																					.																											.	.	.	.	.	.	.	.	.
Query Sequence		M	I	T	G	A	A	Q	M	D	G	A	I	L	V	V	A	A	T	D	G	P	M	P	Q	T	R	E	H	I	L	L	G	R	Q	V	.	G	V	P	Y	I	I	V	F	L	N	K	C	D	M	V	D	D	E	E	L	L	E	L	V	E	M	.	.	.	.	.	.	.	.	.	E	V	R	E	L	L	S	Q	Y
Query Conservation																																					.																											.	.	.	.	.	.	.	.	.
Alig confidence																																					.																											.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	P	L	C	Y	S	D	S	D	A	V	L	L	C	F	D	I	S	R	P	E	T	V	A	L	K	K	W	R	T	E	I	L	D	Y	C	P	S	T	R	V	L	L	I	G	C	K	T	D	L	R	T	D	L	S	T	L	M	E	L	S	H	Q	K	Q	A	P	I	S	Y	E	Q	G	C	A	I	A	K	Q	L
Template Known Secondary structure		G	G	G	G	G	T	T		S								T	T		T	T	T															T	T	S									G	G	G	G	G											T	T																T
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		D	F	P	G	D	D	T	P	I	V	R	G	S	A	L	K	A	L	.	E	G	D	A	E	W	E	A	K	I	L	E	L	A
Query Conservation																				.
Alig confidence				.	.	.	.													.
Template Conservation				.	.	.	.
Template Sequence		G	A	.	.	.	.	E	I	Y	L	E	G	S	A	F	T	S	E	K	S	I	H	S	I	F	R	T	A	S	M	L	C	L
Template Known Secondary structure		T		.	.	.	.	S							T	T	T
Template Predicted Secondary structure				.	.	.	.
Template SS confidence
		160	.					.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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