Return to main results Retrieve Phyre Job Id

Job DescriptionP0CE48
Confidence97.96%DateThu Jan 5 11:30:16 GMT 2012
Rank313Aligned Residues128
% Identity22%Templatec2iy3A_
PDB info PDB header:rna-bindingChain: A: PDB Molecule:signal recognition particle protein ffh; PDBTitle: structure of the e. coli signal recognition particle2 bound to a translating ribosome
Resolution16.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50...... ...60.........70...
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Query Sequence  TKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAARAFDQIDNAPEE. . . KARGITINTSHVEYDTP. . . . . . . . . . . .
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Template Sequence  LKDRNLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQRPAAREQLRLLGEKVGVPVLEVMDGESPESIRRRVEE
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   95....100.........110.........120.........130.........140.........150.........160.........170....
 
   74.....80.........90........ .100.........110.........120.........130.........
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Query Sequence  . . . . . TRHYAHVDCPGHADYVKNMITGAAQ. . . . . . MDGAILVVAATDGPMPQTREHILLGRQVGVPYIIVFLNKCD
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Template Sequence  KARLEARDLILVDTAGRLQIDEPLMGELARLKEVLGPDEVLLVLDAMTGQ. EALSVARAFDEKVGVTGLV. . LTKLD
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   175....180.........190.........200.........210.........220.... .....230.........240... .....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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