Job Description P0CE48 Confidence 100.00% Date Thu Jan 5 11:30:16 GMT 2012 Rank 14 Aligned Residues 338 % Identity 20% Template c2elfA_ PDB info PDB header:translation Chain: A: PDB Molecule:protein translation elongation factor 1a; PDBTitle: crystal structure of the selb-like elongation factor ef-pyl2 from methanosarcina mazei Resolution 1.70 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	V	G	T	I	G	H	V	D	H	G	K	T	T	L	T	A	A	I	T	T	V	L	A	K	T	Y	G	G	A	A	R	A	F	D	Q	I	D	N	A	P	E	E	K	A	R	G	I	T	I	N	T	S	H	V	E	Y	D	T	P	T	R	H	Y	A	H	V	D	C	P	G	H	A	D	Y	V	K	N	M
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	N	V	A	I	I	G	T	E	K	S	G	R	T	S	L	A	A	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	K	G	T	S	S	D	I	T	X	Y	N	N	D	K	E	G	R	N	X	V	F	V	D	A	H	S	Y	P	K	T	L	K	S	L
Template Known Secondary structure									S	T	T	S	S							T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S						S	S	S							S	S	S	S								T	T	T	T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.																									.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	G	A	A	Q	M	D	G	A	I	L	V	V	A	A	T	D	G	P	M	P	Q	T	R	E	H	I	L	L	G	R	Q	V	G	V	P	Y	I	I	V	F	L	N	K	C	D	M	V	D	D	E	E	L	L	E	L	V	E	M	E	V	R	E	L	L	S	Q	Y	D	F	P	G	D	D	T	P	I	V	R
Query Conservation
Alig confidence																		.																																	.																						.	.
Template Conservation																		.																																	.																						.	.
Template Sequence		I	T	A	L	N	I	S	D	I	A	V	L	C	I	P	P	.	Q	G	L	D	A	H	T	G	E	C	I	I	A	L	D	L	L	G	F	K	H	G	I	I	A	L	T	R	S	D	S	T	.	H	X	H	A	I	D	E	L	K	A	K	L	K	V	I	T	S	G	T	V	L	.	.	Q	D	W	E	C	I	S
Template Known Secondary structure							T		S								T	.	T																T	T											G	G	G	S	.																T	T	T	S	T	T	.	.	T	T
Template Predicted Secondary structure																		.																																	.																						.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		G	S	A	L	K	A	L	E	G	D	A	E	W	E	A	K	I	L	E	L	A	G	F	L	D	S	Y	I	P	E	P	E	R	A	I	D	.	K	P	F	L	L	P	I	E	D	V	F	S	I	S	G	R	G	T	V	V	T	G	R	V	E	R	G	I	I	K	V	G	E	E	V	E	I	V	G	I	K	E	T
Query Conservation																																						.
Alig confidence																																						.												.	.	.																									.	.
Template Conservation																																																		.	.	.																									.	.
Template Sequence		L	N	T	N	K	S	A	K	N	P	F	E	G	V	D	E	L	K	A	R	I	N	E	V	A	E	K	I	E	A	E	N	A	E	L	N	S	L	P	A	R	I	F	I	D	H	A	F	.	.	.	N	V	T	C	V	V	L	G	V	V	K	Q	G	I	S	K	D	K	D	K	T	K	I	F	.	.	P	L	D
Template Known Secondary structure						T	T	S	S	S	T	T	T	T																						G	G	G	S											.	.	.													S				T	T							.	.	T	T	T
Template Predicted Secondary structure																																																		.	.	.																									.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.				.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.			.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	S	T	C	T	G	V	E	M	F	R	K	L	L	D	E	G	R	A	G	E	N	V	G	V	L	L	R	G	I	K	R	E	E	I	E	R	G	Q	V	L	A	K	P	G	T	I	K	P	H	T	K	F	E	S	E	V	Y	I	L	S	K	D	E	G	G	R	H	T	P	F	F	K	G	Y	R	P	Q	F
Query Conservation
Alig confidence																																																														.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.
Template Sequence		R	D	I	E	I	R	S	I	Q	S	H	D	V	D	I	D	S	A	P	A	G	T	R	V	G	X	R	L	K	N	V	Q	A	K	D	I	E	R	G	F	I	I	S	D	K	E	I	V	T	T	D	Y	T	L	E	C	T	V	S	K	.	.	.	.	.	.	.	F	T	K	K	I	E	P	A	S	V	L	H	L
Template Known Secondary structure												T	T				S				T	T									S			G	G	G			T	T					S																T	.	.	.	.	.	.	.	T	S			B		T	T
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.								.	.	.	.	.	.	.	.	280	.	.	.	.
		332	.	.	.	.	.	.	.	340	.	.	.	.	.					.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.				.	.	.	.	.	.	.	.	390
Predicted Secondary structure																.	.	.	.																																					.	.	.
Query SS confidence																.	.	.	.																																					.	.	.
Query Sequence		Y	F	R	T	T	D	V	T	G	T	I	E	L	P	.	.	.	.	E	G	V	E	M	V	M	P	G	D	N	I	K	M	V	V	T	L	I	H	P	I	A	M	D	D	G	L	R	F	A	I	R	E	G	G	.	.	.	R	T	V	G	A	G	V	V	A
Query Conservation																.	.	.	.																																					.	.	.
Alig confidence																.	.	.	.																																					.	.	.
Template Conservation
Template Sequence		F	V	G	L	Q	S	E	P	V	R	V	E	K	I	L	V	D	G	N	E	V	E	E	A	K	P	G	S	T	C	V	L	E	L	S	G	N	K	K	L	A	Y	S	K	Q	D	R	F	L	L	A	N	L	D	L	T	Q	R	F	A	A	Y	G	F	S	K
Template Known Secondary structure				T	T													T	T				S		B		T	T																	T	T	S							T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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