Return to main results Retrieve Phyre Job Id

Job DescriptionP0CE48
Confidence97.62%DateThu Jan 5 11:30:16 GMT 2012
Rank329Aligned Residues106
% Identity16%Templatec2b92A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:interferon-induced guanylate-binding protein 1; PDBTitle: crystal-structure of the n-terminal large gtpase domain of human2 guanylate binding protein 1 (hgbp1) in complex with gdp/alf3
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30...... ...40.........50.........60.........70.........80.....
Predicted Secondary structure 












..















.
Query SS confidence 



























. .
















































.
Query Sequence  TKPHVNVGTIGHVDHGKTTLTAAITTVL. . AKTYGGAARAFDQIDNAPEEKARGITINTSHVEYDTPTRHYAHVDCPGH.
Query Conservation   
  
 
 
 



 




   
    ..              
    
   
 
                 

 


.
Alig confidence 



























..










...........









.















.
Template Conservation     
 

 
 
    


 


 
      
         
........... 

       .          




  
Template Sequence  TQPMVVVAIVGLYRTGKSYLMNKLAGKKKGFSLGSTVQSHT. . . . . . . . . . . KGIWMWCVPH. PKKPGHILVLLDTEGLG
Template Known Secondary structure 
SBBSSSSTT
SSSS



SSS


...........
S
.SSSTT


BT
Template Predicted Secondary structure 
























...........
.










Template SS confidence 















































































   35....40.........50.........60.........70..... ....80..... ....90.........100..
 
   86...90.........100.........110.........120......
Predicted Secondary structure  .....







Query SS confidence  . . . . .








































Query Sequence  . . . . . ADYVKNMITGAAQMDGAILVVAATDGPMPQTREHILLGRQV
Query Conservation  .....              
  



 
  
      
 
      
Alig confidence  .....








































Template Conservation              
  
  



  


    
    
  
      
Template Sequence  DVEKGDNQNDSWIFALAVLLSSTFVYNSIGTINQQAMDQLYYVTEL
Template Known Secondary structure 
TTT


SSS

Template Predicted Secondary structure 













Template SS confidence 













































   103......110.........120.........130.........140........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions