Job Description P0CE48 Confidence 99.04% Date Thu Jan 5 11:30:16 GMT 2012 Rank 197 Aligned Residues 167 % Identity 14% Template c1zbdA_ PDB info PDB header:g protein Chain: A: PDB Molecule:rabphilin-3a; PDBTitle: structural basis of rab effector specificity: crystal2 structure of the small g protein rab3a complexed with the3 effector domain of rabphilin-3a Resolution 2.60 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	V	G	T	I	G	H	V	D	H	G	K	T	T	L	T	A	A	I	T	T	V	L	A	K	T	Y	G	G	A	A	R	A	F	D	Q	I	D	N	A	P	E	E	K	A	R	G	I	T	I	N	T	S	H	V	E	Y	D	T	P	T	R	H	Y	A	H	V	D	C	P	G	H	A	D	Y	V	K	N	M
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	K	I	L	I	I	G	N	S	S	V	G	K	T	S	F	L	F	R	Y	A	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	F	T	P	A	F	V	S	T	V	G	I	D	F	K	V	K	T	I	Y	R	N	D	K	R	I	K	L	Q	I	W	D	T	A	G	L	E	R	Y	R	T	I	T
Template Known Secondary structure									S	T	T	S	S										T		.	.	.	.	.	.	.	.	.	.	.	.	.	.				S							S											T	T													S	G	G	G
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.															.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.				.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.
Query SS confidence																																				.	.	.
Query Sequence		I	T	G	A	A	Q	M	D	G	A	I	L	V	V	A	A	T	D	G	P	M	P	Q	T	R	E	H	I	L	L	G	R	Q	V	.	.	.	G	V	P	Y	I	I	V	F	L	N	K	C	D	M	V	D	D	E	E	L	L	E	L	V	E	M	E	V	R	E	L	L	S	Q	Y	D	F	P	G	D	D	T	P
Query Conservation																																				.	.	.
Alig confidence																																				.	.	.																																	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.
Template Sequence		T	A	Y	Y	R	G	A	X	G	F	I	L	X	Y	D	I	T	N	E	E	S	F	N	A	V	Q	D	W	S	T	Q	I	K	T	Y	S	W	D	N	A	Q	V	L	L	V	G	N	K	C	D	X	E	D	E	R	V	V	S	S	E	R	G	R	Q	L	A	D	H	L	.	.	.	.	.	.	.	.	G	F	E
Template Known Secondary structure			T	T	G	G	G		S								T	T																			S		S	S										T	T		T	T	S			S													.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.									.	.	160
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	R	G	S	A	L	K	A	L	E	G	D	A	E	W	E	A	K	I	L	E	L	A	G	F	L	D	S	Y	I	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	F	E	A	S	A	K	D	N	I	N	V	K	Q	T	F	E	R	L	V	D	V	I	C	E	K	X	S	E	S	L	D
Template Known Secondary structure						B	T	T	T	T	B	S	S																		T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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