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Job DescriptionP0CE48
Confidence100.00%DateThu Jan 5 11:30:16 GMT 2012
Rank9Aligned Residues377
% Identity32%Templatec1skqB_
PDB info PDB header:translationChain: B: PDB Molecule:elongation factor 1-alpha; PDBTitle: the crystal structure of sulfolobus solfataricus elongation2 factor 1-alpha in complex with magnesium and gdp
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  KPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAARAFD. . . . QIDNAPEEKARGITINTSHVEYDTPTRHYAHVDCPGH
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Template Sequence  KPHLNLIVIGHVDHGKSTLVGRLLMDRGFIDEKTVKEAEEAAKKLGKESEKFAFLLDRLKEEMRFETKKYFFTIIDAPGH
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STTSSB


SSTT
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Query Sequence  ADYVKNMITGAAQMDGAILVVAATDG. . . . . . . PMPQTREHILLGRQVGVPYIIVFLNKCDMV. . . DDEELLELVEMEVR
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Template Sequence  RDFVKNMITGASQADAAILVVSAKKGEYEAGMSVEGQTREHIILAKTMGLDQLIVAVNKMDLTEPPYDEKRYKEIVDQVS
Template Known Secondary structure  TTSSS

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Query Sequence  ELLSQYDFPGDDTPIVRGSALKALEGDAEWEAKILE. . . LAGFLDSYIPEPERAIDKPFLLPIEDVFSISGRGTVVTGRV
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Template Sequence  KFMRSYGFNTNKVRFVPVVAPSGDNITHKSENMKWYNGPTLEEYLDQLELPPKPVDKPLRIPIQDVYSISGVGTVPVGRV
Template Known Secondary structure  TT


TT
BTTTTBTTTB

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GGGS

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Query Sequence  ERGIIKVGEEVEIVGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVLAKPGT. IKPHTKFESEVYI
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Template Sequence  ESGVLKVGDKIVFM. . PAGKVGEVRSIETHHTKMDKAEPGDNIGFNVRGVEKKDIKRGDVVGHPNNPPTVADEFTARIIV
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Query Sequence  LSKDEGGRHTPFFKGYRPQFYFRTTDVTGTIELP. . . . . . . . . . . . . EGVEMVMPGDNIKMVVTLIHPIAMDDGL. . . . .
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Template Sequence  VW. . . . . HPTALANGYTPVLHVHTASVACRVSELVSKLDPRTGQEAEKNPQFLKQGDVAIVKFKPIKPLCVEKYNEFPPL
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   333. .....340.........350.........360.........370.........380.........390.........400.......
 
   374.....380.........390...
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Query Sequence  . RFAIREGGRTVGAGVVAKVL
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Template Sequence  GRFAMRDMGKTVGVGIIVDVK
Template Known Secondary structure  STT
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   408.410.........420........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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