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Job DescriptionP0CE48
Confidence99.75%DateThu Jan 5 11:30:16 GMT 2012
Rank72Aligned Residues162
% Identity21%Templatec1lnzA_
PDB info PDB header:cell cycleChain: A: PDB Molecule:spo0b-associated gtp-binding protein; PDBTitle: structure of the obg gtp-binding protein
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40.........50.........60.........70... ......80..... .
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Query Sequence  VGTIGHVDHGKTTLTAAITTVLAKTYGGAARAFDQIDNAPEEKARGITINTSHVEYDTP. TRHYAHVDCPGH. . . . . . . A
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Template Sequence  VGLVGFPSVGKSTLLSVVSSAKPKIADYH. . . . . . . . . . . . . . . . FTTLVPNLGXVETDDGRSFVXADLPGLIEGAHQGV
Template Known Secondary structure  SSTTSSS

SSTT................SS





SSS
TT
TT
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   161........170.........180......... 190.........200.........210.........220....
 
   87..90.........100.........110.........120..... ....130.........140.........150........
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Query Sequence  DYVKNMITGAAQMDGAILVVAATDGPMPQTREHILLGRQ. . . . . . . . VGVPYIIVFLNKCDMVDDEELLELVEMEVRELL
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Template Sequence  GLGHQFLRHIERTRVIVHVIDXSGLEGRDPYDDYLTINQELSEYNLRLTERPQIIVANKXDXPEAAENLEAFKEKLT. . .
Template Known Secondary structure  TT

SS
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S
SSTTTS
B
B
TTSTT

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   225....230.........240.........250.........260.........270.........280.........290.........300.
 
   159160.........170.........180.........190.........200.........210
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Query Sequence  SQYDFPGDDTPIVRGSALKALEGDAEWEAKILELAGFLDSYIPEPERAIDKP
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Template Sequence  . . . . . . . DDYPVFPISAVTREGLRE. . . . . . . . LLFEVANQLENTPEFPLYD
Template Known Secondary structure  .......S


B


SS

SSTT........TS




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   302.......310......... 320.........330........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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