Job Description P0CE48 Confidence 94.86% Date Thu Jan 5 11:30:16 GMT 2012 Rank 430 Aligned Residues 125 % Identity 20% Template c1j8yF_ PDB info PDB header:signaling protein Chain: F: PDB Molecule:signal recognition 54 kda protein; PDBTitle: signal recognition particle conserved gtpase domain from a.2 ambivalens t112a mutant Resolution 2.00 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.								.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																																															.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Query Sequence		R	T	K	P	H	V	N	V	G	T	I	G	H	V	D	H	G	K	T	T	L	T	A	A	I	T	T	V	L	A	K	T	Y	G	G	A	A	R	A	F	D	Q	I	D	N	.	.	.	.	.	.	.	A	P	E	E	K	A	R	G	I	T	I	N	T	S	H	V	E	Y	D	.	.	.	.	.	.	.	.	.
Query Conservation																																															.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.																											.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.
Template Sequence		P	D	K	I	P	Y	V	I	M	L	V	G	V	Q	G	.	.	.	.	T	T	A	G	K	L	A	Y	F	Y	K	K	K	G	F	K	V	G	L	V	G	A	D	V	Y	R	P	A	A	L	E	Q	L	Q	Q	L	G	Q	Q	I	G	V	P	V	Y	G	E	P	G	E	K	D	V	V	G	I	A	K	R	G	V
Template Known Secondary structure			S	S	S	S								S			.	.	.	.													T	T											S	S															T							T	T
Template Predicted Secondary structure																	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.					.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
						72	.	.	.	.	.	.	.	80	.	.	.	.							.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.														.	.	.	.	.	.														.	.
Query SS confidence		.	.	.	.														.	.	.	.	.	.														.	.
Query Sequence		.	.	.	.	T	P	T	R	H	Y	A	H	V	D	C	P	G	.	.	.	.	.	.	H	A	D	Y	V	K	N	M	I	T	G	A	A	.	.	Q	M	D	G	A	I	L	V	V	A	A	T	D	G	P	M	P	Q	T	R	E	H	I	L	L	G	R	Q	V	G	V	P	Y	I	I	V	F	L	N	K	C	D
Query Conservation		.	.	.	.														.	.	.	.	.	.														.	.
Alig confidence		.	.	.	.														.	.	.	.	.	.														.	.																.																				.	.
Template Conservation																																																							.																				.	.
Template Sequence		E	K	F	L	S	E	K	M	E	I	I	I	V	D	T	A	G	R	H	G	Y	G	E	E	A	A	L	L	E	E	M	K	N	I	Y	E	A	I	K	P	D	E	V	T	L	V	I	D	A	S	I	G	Q	.	K	A	Y	D	L	A	S	K	F	N	Q	A	S	K	I	G	T	I	I	.	.	I	T	K	M	D
Template Known Secondary structure							T	T		S									S			T	T																			S								G	G	G	G	G	.	G													T	T					.	.				T	T
Template Predicted Secondary structure																																																							.																				.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.	250

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions