Job Description P0CE48 Confidence 100.00% Date Thu Jan 5 11:30:16 GMT 2012 Rank 22 Aligned Residues 264 % Identity 21% Template c1g7tA_ PDB info PDB header:translation Chain: A: PDB Molecule:translation initiation factor if2/eif5b; PDBTitle: x-ray structure of translation initiation factor if2/eif5b2 complexed with gdpnp Resolution 2.00 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	K	P	H	V	N	V	G	T	I	G	H	V	D	H	G	K	T	T	L	T	A	A	I	T	T	V	L	A	K	T	Y	G	G	A	A	R	A	F	D	Q	I	D	N	A	P	E	E	K	A	R	G	I	T	I	N	T	S	H	V	E	Y	D	T	P	T	R	H	Y	A	H	V	D	C	P	G	H	A	D
Query Conservation
Alig confidence								.																									.	.
Template Conservation								.																									.	.
Template Sequence		K	I	R	S	P	I	.	V	S	V	L	G	H	V	D	H	G	K	T	T	L	L	D	H	I	R	G	S	A	V	A	.	.	S	R	I	T	Q	H	I	G	A	T	E	I	P	M	D	V	I	E	G	I	C	G	D	F	L	K	K	F	S	I	R	E	T	L	P	G	L	F	F	I	D	T	P	G	H	E	A
Template Known Secondary structure								.						S	T	T	S	S														T	.	.	T						T	T													S		G	G	G	T	T		G	G	G	G	T											T	T	T
Template Predicted Secondary structure								.																									.	.
Template SS confidence
		2	.	.	.	.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.																					.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	V	K	N	M	I	T	G	A	A	Q	M	D	G	A	I	L	V	V	A	A	T	D	G	P	M	P	Q	T	R	E	H	I	L	L	G	R	Q	V	G	V	P	Y	I	I	V	F	L	N	K	C	D	M	V	D	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	L
Query Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.
Template Sequence		F	T	T	L	R	K	R	G	G	A	L	A	D	L	A	I	L	I	V	D	I	N	E	G	F	K	P	Q	T	Q	E	A	L	N	I	L	R	M	Y	R	T	.	P	F	V	V	A	A	N	K	I	D	R	I	H	G	W	R	V	H	E	G	R	P	F	M	E	T	F	S	K	Q	D	I	Q	V	Q	Q	K	L
Template Known Secondary structure		G	G	G	S			T	T			S		S								T	T	T																T	T		.									G	G	G	S	T	T					T	T								T	T	S
Template Predicted Secondary structure																																											.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.											.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.
Query Sequence		E	L	V	E	M	E	V	R	E	L	L	S	Q	Y	D	F	P	G	.	.	.	.	.	.	.	.	.	.	D	D	T	P	I	V	R	G	S	A	L	K	A	L	E	G	D	A	E	W	E	A	K	I	L	E	L	A	G	F	L	D	S	Y	I	P	E	P	E	R	A	I	D	K	P	F	L	L	P	I	E	D
Query Conservation																				.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.																																		.	.	.
Template Conservation																																																															.	.	.
Template Sequence		D	T	K	V	Y	E	L	V	G	K	L	H	E	E	G	F	E	S	E	R	F	D	R	V	T	D	F	A	S	Q	V	S	I	I	P	I	S	A	I	T	G	E	G	I	P	E	L	L	T	M	L	M	G	L	A	Q	Q	Y	L	R	E	.	.	.	Q	L	K	I	E	E	D	S	P	A	R	G	T	I	L	E
Template Known Secondary structure															T	T						T	T	T		S		T	T	T	S								S	S	S		T	T																	S	G	.	.	.	G	G				T	T	S	B
Template Predicted Secondary structure																																																															.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.				.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.		.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		V	F	S	I	S	G	R	G	T	V	V	T	G	R	V	E	R	G	I	I	K	V	G	E	E	V	E	I	V	G	I	K	E	T	Q	K	S	T	C	T	G	V	E	M	F	R	.	K	L	L	D	E	G	R	A	G	E	N	V	G	V	L
Query Conservation																																																.
Alig confidence																																																.
Template Conservation
Template Sequence		V	K	E	E	T	G	L	G	M	T	I	D	A	V	I	Y	D	G	I	L	R	K	D	D	T	I	A	M	M	T	S	K	D	V	I	S	T	R	I	R	S	L	L	K	P	R	P	S	R	K	K	F	Q	K	V	D	E	V	V	A	A	A
Template Known Secondary structure						T	T	S											S				T	T							B	S	S	S							S											S					S				S	S
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions