Job Description P0AA63 Confidence 1.11% Date Thu Jan 5 11:12:02 GMT 2012 Rank 93 Aligned Residues 142 % Identity 14% Template c3dinF_ PDB info PDB header:membrane protein, protein transport Chain: F: PDB Molecule:preprotein translocase subunit secy; PDBTitle: crystal structure of the protein-translocation complex formed by the2 secy channel and the seca atpase Resolution 4.50 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	F	V	L	F	V	I	L	F	L	E	N	G	L	L	P	A	A	F	L	P	G	D	S	L	L	V	L	V	G	V	L	I	A	K	G	A	M	G	Y	P	Q	T	I	L	L	L	T	V	A	A	S	L	G	C	W	V	S	Y	I	Q	G	R	W	L	G	N	T	R	T	V	Q	N	W	L	S	H	L	P
Query Conservation
Alig confidence																																									.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.
Template Sequence		I	F	T	F	L	A	L	I	V	F	R	M	G	I	Y	I	P	V	P	G	L	N	L	S	F	Y	D	V	F	T	G	G	A	L	S	R	F	S	V	.	.	.	.	.	.	F	T	M	S	V	T	P	Y	I	T	A	S	I	I	L	Q	L	L	A	S	V	M	P	S	L	K	E	M	L	R	E	G	E	E	G
Template Known Secondary structure																S		S	S							T	T						S	S	S	S				S	.	.	.	.	.	.	S	S	S	S																		S		S	S	S	S		S			T	T
Template Predicted Secondary structure																																									.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.							.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	Y	H	Q	R	A	H	H	L	F	H	K	H	G	L	S	A	L	L	I	G	R	F	I	A	F	V	R	T	L	L	P	T	I	A	G	L	S	G	L	N	N	A	R	F	Q	F	F	N	W	M	S	G	L	L	W	V	L	I	L	T	T	L	G	Y	M	L	G	K
Query Conservation
Alig confidence														.	.
Template Conservation														.	.
Template Sequence		R	K	K	F	A	K	Y	T	R	R	L	T	.	.	L	L	I	G	G	F	Q	A	F	F	V	S	F	S	L	A	R	S	N	P	D	M	V	A	P	G	V	N	V	L	Q	F	T	V	L	S	T	M	S	M	L	A	G	T	M	F	L	L	W	L	G	E	R	I	T	E
Template Known Secondary structure														.	.																				S	S								S	S																									T	T
Template Predicted Secondary structure														.	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.			.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions