Return to main results Retrieve Phyre Job Id

Job DescriptionP76086
Confidence91.26%DateThu Jan 5 12:18:38 GMT 2012
Rank117Aligned Residues85
% Identity19%Templated3deua1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  KLDTFIQHAVNAVPVSGTSLISSLYGDSLSHRGGEIWLGSLAALLEGLGFGERFVRTALFRLNKEGWLDVSRIGRRSFYS
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Template Sequence  IWRALIDHRLKPLELTQTHWVTLHN. . . IHQLPPDQSQIQLAKAI. . . GIEQPSLVRTLDQLEDKGLIS. . . . . RQKRIK
Template Known Secondary structure  TTTTT

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   16...20.........30.........40 .........50....... ..60.........70........ .80....
 
   83......90........
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Query Sequence  LSDKGLRLTRRAESKI
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Template Sequence  LTEKAEPLIAEMEEVI
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GGG
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   93......100........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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