Return to main results Retrieve Phyre Job Id

Job DescriptionP76086
Confidence96.95%DateThu Jan 5 12:18:38 GMT 2012
Rank16Aligned Residues54
% Identity19%Templated3ctaa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   45....50.........60.........70.........80.........90........
Predicted Secondary structure 










Query SS confidence 





















































Query Sequence  ALLEGLGFGERFVRTALFRLNKEGWLDVSRIGRRSFYSLSDKGLRLTRRAESKI
Query Conservation   
    



 









  
 
   
 

 
 
 

  
      
  

Alig confidence 





















































Template Conservation 


  
     
 
  
  

  


 
  
 
   
 

  
   
       
Template Sequence  KLADMLGISQQSASRIIIDLEKNGYITRTVTKRGQILNITEKGLDVLYTEFADL
Template Known Secondary structure  TS
TTSTT
Template Predicted Secondary structure 











Template SS confidence 





















































   30.........40.........50.........60.........70.........80...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions