Return to main results Retrieve Phyre Job Id

Job DescriptionP76086
Confidence96.38%DateThu Jan 5 12:18:38 GMT 2012
Rank45Aligned Residues89
% Identity16%Templated2hr3a1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  LDTFIQHAVNAVPVSGTSLISSLYGDSLSHRGGEIWLGSLAALLEGLGFGERFVRTALFRLNKEGWLDVSRIGRRSFYSL
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Template Sequence  VTTLTRRLRREAQADPVQFSQLVVLGAIDRLGGDVTPSEL. . . AAAERXRSSNLAALLRELERGGLIVRHART. . . RVSL
Template Known Secondary structure  TT


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   17..20.........30.........40.........50...... ...60.........70.........80...... ...90
 
   84.....90........
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Query Sequence  SDKGLRLTRRAESKI
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Template Sequence  SSEGRRNLYGNRAKR
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   97..100.........110.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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