Return to main results Retrieve Phyre Job Id

Job DescriptionP76086
Confidence86.02%DateThu Jan 5 12:18:38 GMT 2012
Rank134Aligned Residues45
% Identity22%Templated1yyva1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain HxlR-like
Resolution2.35

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   47..50.........60.........70....... ..80.........90.
Predicted Secondary structure 








...

Query SS confidence 






























. . .













Query Sequence  LEGLGFGERFVRTALFRLNKEGWLDVSRIGR. . . RSFYSLSDKGLRLT
Query Conservation      



 









  
 
   
 

... 
 
 

  
    
Alig confidence 






























...













Template Conservation 
 
  

   

 

  
   


 
      
  


 

  
  
 
Template Sequence  LRRXGGVSEXLAQSLQALEQDGFLNRVSYPVVPPHVEYSLTPLGEQVS
Template Known Secondary structure 

TT



T

SSS

Template Predicted Secondary structure 
















Template SS confidence 















































   51........60.........70.........80.........90........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions